Pairwise Alignments

Query, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 660 a.a., two-component sensor histidine kinase from Marinobacter adhaerens HP15

 Score =  125 bits (313), Expect = 9e-33
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 60/328 (18%)

Query: 407 DRMLDLLQRRNAQIQAAAEQLEMKVE--ERTRSLQDKTLELQRNVALLNETRQQLVTNEK 464
           +R LDL   + + ++A +++   + E  E+   L      L +++  L  T+  +   EK
Sbjct: 329 ERTLDLENSKESLMRALSKERLAQAELIEKQNELYQANQALSQSLDQLKRTQVMMTQQEK 388

Query: 465 LTALGELTAGIAHEINNPTAVILGNMELLRYELGDKAEVVKE--------EIDLVIQQVG 516
           L ++G L AG+AHEINNP   IL N+  L   + D   ++++        EI+ V    G
Sbjct: 389 LASIGHLAAGVAHEINNPLGFILSNINRLNEYINDLIAIIEQSRGWLSSGEIETVSLYAG 448

Query: 517 RIST------------------------------IIRSLLQYSRPGEFNAPLEMHPITPI 546
           R+S                               II++L  +SR        E   +  +
Sbjct: 449 RLSEALEQYDYEFIRDDLPSLIEDCVEGGARVKEIIQNLKDFSRADNSGDTFEHQNLRKL 508

Query: 547 IEEMLVLVRHSIQKQEVVLITELNASCP----VQVNRPQLLQVLINLVVNAAHAM---DG 599
           IE+ L L+     K E    +++   CP    + +      QV+ NLV+NA HA+   + 
Sbjct: 509 IEKTLNLL-----KNETKYTSQVELVCPKGLEIDLLPGPFSQVISNLVINAVHAIKKAER 563

Query: 600 KGRIWVRTYDWVQQDIAIGVKIEVEDEGSGIEPEQLGRIFDPFYTTRK--DGTGLGLSLS 657
           KG I +     +  D    V ++V D G GI  + +GRIFDPF+TT+K  +GTGLG++++
Sbjct: 564 KGLITI-----IVTDTPESVCVKVSDNGCGIAKQHIGRIFDPFFTTKKVGEGTGLGMNIA 618

Query: 658 YGII-KRIGGTIEVSSVLGKGSIFTIGL 684
           Y II  R GG IEV S  G G+ F I L
Sbjct: 619 YDIIANRHGGKIEVVSEEGTGTEFCIEL 646