Pairwise Alignments

Query, 219 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 256 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 59.7 bits (143), Expect = 5e-14
 Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 39/175 (22%)

Query: 45  GAFSFPFVYLATDLTVRIFGQTPARSIILKAMVPALMISYVMGVVF------------HQ 92
           G  ++P +++ TD+    FG    R +   +++ A++IS+   VV+            HQ
Sbjct: 61  GVLTWPIIFIMTDIINEYFGVKQVRFL---SILTAILISFAFIVVWGSMHLTAADFWVHQ 117

Query: 93  G----------SFQGIDSLSQWNTFVFRIAFASFAAYLIGQLMDITVFARLRQ---SRSW 139
                      +F GI     W      I   S  A++IGQ++D+ +F ++++    R+ 
Sbjct: 118 NINGEDLNMNNAFAGIFGQGMW------IIVGSITAFIIGQMVDVLIFHKIKRITGERAL 171

Query: 140 WVAPAASTIVGNLVDTLVFFSVAFYASTDSFMATNWPEIAA---VDYSFKLLVSL 191
           W+    ST+V   +D+ V   +AFY +       +W ++ A   V Y++K +V++
Sbjct: 172 WLRATGSTLVSQFIDSFVVIFIAFYINPQYHY--SWQQVFAIGLVGYTYKFVVAI 224