Pairwise Alignments

Query, 464 a.a., ABC transporter, ATP-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 554 a.a., ABC transporter ATP-binding protein from Azospirillum brasilense Sp245

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 116/457 (25%), Positives = 203/457 (44%), Gaps = 62/457 (13%)

Query: 14  GSQLPLVFQEITLTIGRGQCHCVSGPTGSGKSSLINLLAGAQNRP---------HEG-DI 63
           G+  P   Q++T T+  G+  CV G +GSGKS   + + G   +          H+G ++
Sbjct: 19  GADRPHAVQDLTFTLEHGEILCVVGESGSGKSMTAHAVMGLLPKAVTVSSGEIRHQGTNV 78

Query: 64  WRHPQLVT--------GLVMQDPQTQLHR-QTVGAEVVFSLE-NLGIPAESMLPKVQHAL 113
           +  P+            ++ Q+P T L+    VG ++   L  +  +   +   +V   L
Sbjct: 79  FSLPERDQRALRGGRIAMIFQEPMTALNPLMRVGDQIDEVLRYHTTLDRAARRARVVELL 138

Query: 114 RRVGL----FLRLDTPVSTLSLGQKYRLMIAAQLVCEPDLLLLDEPWAQLDDHGVSELLV 169
             VGL     LR   P   LS GQ+ R+MIA  L  EPD+L+ DEP   LD     ++L 
Sbjct: 139 ASVGLPEPDHLRRSYPFR-LSGGQRQRVMIAMALAVEPDILIADEPTTALDVTTQKQILE 197

Query: 170 VLRNL-INEGMALVLVEHNATAFAEIIQYYWQLEDGHLSAGLHQTPEIL---------PV 219
           +++++     M ++ + H+    AEI      ++ G +   +    E+L          +
Sbjct: 198 LIQDIQAKRRMGVMFITHDFGVVAEIAHRVAVMQRGQI-VEIGTAEEVLNRPKHPYTRQL 256

Query: 220 IAPAWRTASKCEPFGKV---LVQAEPFEFSFDSGHLLFTCPN--------GFKLYAGEIV 268
           IA         E F +    ++ AE    +F  G   FT              ++ GE V
Sbjct: 257 IAAVPHLIEHREDFTRARQPVLTAEKVCKTFHIGGGFFTPGRKVVAGDDLSLTIHQGETV 316

Query: 269 TLIGDNGSGKTSLLKTLAGALS------LKQRLPLKVLGRRPKLGVYGAELGLLMQRPSR 322
            L+G++GSGK++L +++ G +       L + + L  L R P    Y   + ++ Q P  
Sbjct: 317 GLVGESGSGKSTLGRSIVGLIKPDSGRILFEGVDLLSLSR-PAFRPYRRHVQMVFQAPYA 375

Query: 323 QLFETTVLAEM------QFSLKRFELPCERAAQLLEELDLN-HLAELPPHQLSYGQQHLI 375
            L     + ++       F   R +   E+A  LL+ + L+   AE  PH+ S GQ+  I
Sbjct: 376 SLNPRHTVGDIITQGPVAFGEDRHKA-LEKAKALLKLVGLDASAAERFPHEFSGGQRQRI 434

Query: 376 ALASLACMRPKVLLLDDPLAGMDKHYSSKVWYLLQKL 412
           ++A    + PK+L+ D+P++ +D    ++V  LL+ L
Sbjct: 435 SIARALALEPKLLIADEPVSALDVSVQAQVLDLLEDL 471



 Score = 55.1 bits (131), Expect = 6e-12
 Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 19/175 (10%)

Query: 260 FKLYAGEIVTLIGDNGSGKTSLLKTLAGALSLK----------QRLPLKVLGRRPKLGVY 309
           F L  GEI+ ++G++GSGK+     + G L             Q   +  L  R +  + 
Sbjct: 31  FTLEHGEILCVVGESGSGKSMTAHAVMGLLPKAVTVSSGEIRHQGTNVFSLPERDQRALR 90

Query: 310 GAELGLLMQRPSRQLFETTVLAEMQFSLKRFELPCERAAQLLEELDL---------NHLA 360
           G  + ++ Q P   L     + +    + R+    +RAA+    ++L         +HL 
Sbjct: 91  GGRIAMIFQEPMTALNPLMRVGDQIDEVLRYHTTLDRAARRARVVELLASVGLPEPDHLR 150

Query: 361 ELPPHQLSYGQQHLIALASLACMRPKVLLLDDPLAGMDKHYSSKVWYLLQKLTAQ 415
              P +LS GQ+  + +A    + P +L+ D+P   +D     ++  L+Q + A+
Sbjct: 151 RSYPFRLSGGQRQRVMIAMALAVEPDILIADEPTTALDVTTQKQILELIQDIQAK 205