Pairwise Alignments

Query, 503 a.a., transcriptional regulator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 510 a.a., XRE family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  780 bits (2014), Expect = 0.0
 Identities = 378/502 (75%), Positives = 428/502 (85%), Gaps = 4/502 (0%)

Query: 1   MRKSHFLGTKIRNLRKRNNLTMEDLSARCIRVDASSAPSVSYLSMIERGKRVPSAEMLAV 60
           MRKSHFLGTKIRNLRKRNNLTMEDLSARC+RVDA SAPSVSYLSMIERGKRVPSA MLAV
Sbjct: 8   MRKSHFLGTKIRNLRKRNNLTMEDLSARCVRVDADSAPSVSYLSMIERGKRVPSAGMLAV 67

Query: 61  IATVFQKDVDWFLDDVPEESAITPDKGRRGGISGMALEPSFLFSNDILQIAIPEMLSQTG 120
           IA VFQK+VDWFLDD PEE AITP KG RGGISGMALEPSFLFSN+ILQIAIPEMLSQTG
Sbjct: 68  IAAVFQKEVDWFLDDAPEEQAITPVKGSRGGISGMALEPSFLFSNEILQIAIPEMLSQTG 127

Query: 121 ISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGLKRMPLSLDEMLDIAKGVGLKIKWIDS 180
           ISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGLKRMPLSL+++L I + +GL +KW   
Sbjct: 128 ISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGLKRMPLSLEDLLAIVQRLGLVVKWFTR 187

Query: 181 TPQEVIDERGVSSHQLVTSFFEPPSTIYINKMLKNRPSRLKYDLAAHIGHCVLHNKDGLK 240
            P+ + +E G     ++TS+FE P+ I +N++L     RLKYDLA HIGH VLHNKDGLK
Sbjct: 188 APKAIREEAGAGKQHIITSYFEQPNKICLNQLLNQHTRRLKYDLAVHIGHSVLHNKDGLK 247

Query: 241 SVMISGRK----LQMDEEVTMQSNTLNAQDILHAWRDFESSFFAGALLCPKVPYRQLLDR 296
           S+M++GR     L  + +   QS+T++AQDILHAWRDFESSFFAGALLCPKVP+RQLLDR
Sbjct: 248 SIMVAGRSHGTSLVDEADNRGQSSTVDAQDILHAWRDFESSFFAGALLCPKVPFRQLLDR 307

Query: 297 HGYEIEVHKQLQVSASVAMRRMTVVSPYPHWHYFDAYAPGKLKAVYRGNGIPLPWGNMRL 356
           HGYEI+V K + VS SVAMRRMT VSPY HWHYFDAY+PGKLKAVYRGNGIPLPWGNMR 
Sbjct: 308 HGYEIDVAKLVDVSPSVAMRRMTAVSPYSHWHYFDAYSPGKLKAVYRGNGIPLPWGNMRQ 367

Query: 357 VEDPCQHWAVFRMISEPSVGTSAQISILNVGNEPRIYCCESIKVEDSAGNPHVLCAGIDL 416
           VEDPCQHWAVFRMI+  + G+SAQISIL+V NEP+IYCCESI+V+D AGNPHVLCAGIDL
Sbjct: 368 VEDPCQHWAVFRMINASTQGSSAQISILDVANEPKIYCCESIRVKDLAGNPHVLCAGIDL 427

Query: 417 NPAIEAQGKDALSIAHDLKAACVTGGGSVAIPKHIKSDLVSIAKILNINWIERGIKNDAR 476
           NPAIEAQG DA  +A  LK  CV  GGS  +P +IK+D+  +AKILNINW+ERGI ++AR
Sbjct: 428 NPAIEAQGGDANQVAQQLKEVCVDNGGSAPLPSNIKTDIKRVAKILNINWVERGIDSEAR 487

Query: 477 LICSRGAVCPRQPSCYQAGKSQ 498
           LICSRGA CPR+PSCY++G  Q
Sbjct: 488 LICSRGASCPRKPSCYESGGCQ 509