Pairwise Alignments

Query, 177 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 180 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  135 bits (341), Expect = 3e-37
 Identities = 74/162 (45%), Positives = 96/162 (59%), Gaps = 4/162 (2%)

Query: 20  SLPSLAAVPESEPELVFESLSKSTTTDPLPLGTLLDSEGKLLPIPVEQS-ALDYSPPTVN 78
           SL  + A    + +    S + ++ T  LP    LDSEG  L IP   + AL+Y      
Sbjct: 19  SLLFICAAQAQDKDAPLNSKAIASETITLPADGALDSEGNPLLIPDNPTGALNYRASPTQ 78

Query: 79  IDNESPKAKTDKTQSTKTKK---KKLSRKQQLASREKVANDPSCRWLDARMSQLETQIGN 135
             +   K  T K +  +TKK   K+LSRKQQLASR+ VA+DPSCRWLD RMS LE  +  
Sbjct: 79  PKSRRDKRATQKPKQKRTKKLSQKQLSRKQQLASRQHVADDPSCRWLDKRMSHLEKSLKR 138

Query: 136 KQDKAADYQSDELSARRQEWQCLKCGVEGPNQDDHHRCQYRR 177
           +  +   YQ +EL AR+ EW C+KCG EGP+Q DHH+CQYRR
Sbjct: 139 QAKQDYGYQDEELRARQSEWVCMKCGAEGPSQSDHHKCQYRR 180