Pairwise Alignments

Query, 1044 a.a., AcrB/AcrD/AcrF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1044 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 1957 bits (5069), Expect = 0.0
 Identities = 996/1044 (95%), Positives = 1030/1044 (98%)

Query: 1    MARFFIDRPIFAWVIALIIMLAGVLSIRTLPVSQYPSIAPPTVVISANYPGASAKIVEDS 60
            MARFFIDRPIFAWVIALIIMLAGVLSIR+LPVSQYPSIAPPTVVISANYPGASAKIVEDS
Sbjct: 1    MARFFIDRPIFAWVIALIIMLAGVLSIRSLPVSQYPSIAPPTVVISANYPGASAKIVEDS 60

Query: 61   VTQVIEQRMKGIDHLRYIASTSDSFGNAEITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ 120
            VTQVIEQRMKGIDHLRYIASTSDSFGNA ITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ
Sbjct: 61   VTQVIEQRMKGIDHLRYIASTSDSFGNASITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ 120

Query: 121  EVQAQGVDVNKSSSGFLMVLGFVSTDGSLDKGDIADYVGANVQDPMSRVPGVGEIQLFGA 180
            EVQ+QGV+VNKSSSGFLMVLGFVSTDGSLDKGDIADYVGAN+QDPMSRVPGVGEIQ+FGA
Sbjct: 121  EVQSQGVNVNKSSSGFLMVLGFVSTDGSLDKGDIADYVGANIQDPMSRVPGVGEIQIFGA 180

Query: 181  QYAMRIWLDPLKLTQYNLTSLEVISAIRAQNAQVSAGQLGGTPSIQGQELNATVSAQSRL 240
            QYAMRIWLDPLKLTQYNLTSL+V+SAIRAQNAQVSAGQLGGTPS+ GQELNATVSAQSRL
Sbjct: 181  QYAMRIWLDPLKLTQYNLTSLDVVSAIRAQNAQVSAGQLGGTPSLPGQELNATVSAQSRL 240

Query: 241  QTPEEFRKIILKSDTSGANVFLGDVARVELGSESYAVVSFYNGKPATGLAIKLATGANAL 300
            QTPE+FRKII+KSDTSGANVFLGDVARVELGSESYAV S YNGKPA+G+AIKLATGANAL
Sbjct: 241  QTPEQFRKIIIKSDTSGANVFLGDVARVELGSESYAVESLYNGKPASGIAIKLATGANAL 300

Query: 301  DTAEAVRDKVEELRPFFPQGLDVVYPYDTTPFVEKSIEGVVHTLLEAIVLVFVIMYLFLQ 360
            DTAEAVR KVEELRPFFP GLDVVYPYDTTPFVEKSIEGVVHTLLEAIVLVFVIMYLFLQ
Sbjct: 301  DTAEAVRAKVEELRPFFPAGLDVVYPYDTTPFVEKSIEGVVHTLLEAIVLVFVIMYLFLQ 360

Query: 361  NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM 420
            NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
Sbjct: 361  NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM 420

Query: 421  SEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL 480
            +EEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
Sbjct: 421  AEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL 480

Query: 481  SVLVALILTPALCATMLKPVQKGHGHIETGFFGWFNRNFDRLTNRYESSVAGIVKRGFRV 540
            SVLVALILTPALCATMLKP++KGHGHIETGFFGWFNR FDRLTNRYESSVAGI+KR FRV
Sbjct: 481  SVLVALILTPALCATMLKPLKKGHGHIETGFFGWFNRGFDRLTNRYESSVAGIIKRSFRV 540

Query: 541  MMIYVALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTLKVLDKVSDHFMAE 600
            MMIY ALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTLKVL+KVSDH++AE
Sbjct: 541  MMIYAALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTLKVLEKVSDHYLAE 600

Query: 601  EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVQSIAGRAMGAFSQIKDAFV 660
            EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVQSIAGRAMG FSQ+K+AFV
Sbjct: 601  EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVQSIAGRAMGVFSQMKEAFV 660

Query: 661  FAFVPPAVIELGTANGFDMYLQDKNGQGHDKLIAARNQLLGMAAQNPNLMGVRPNGQEDA 720
            FAFVPPAVIELGTANGFDMYLQDKNGQGHDKL+AARNQLLGMAAQNPNL+GVRPNGQEDA
Sbjct: 661  FAFVPPAVIELGTANGFDMYLQDKNGQGHDKLVAARNQLLGMAAQNPNLVGVRPNGQEDA 720

Query: 721  PIYQLHIDHAKLSALGVDIANVNSVLATAWGGSYVNDFIDRGRVKKVFVQGDAQYRMQPE 780
            PIYQLHIDHAKLSALG++IANVNSVLATAWGGSYVNDFIDRGRVKKV+VQGDAQYRMQPE
Sbjct: 721  PIYQLHIDHAKLSALGIEIANVNSVLATAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQPE 780

Query: 781  DLNTWYVRNNKGDMVPFSAFATGSWEYGSPRLERFNGLPAVNIQGATAPGFSTGAAMTIM 840
            DL+TWYVRNNKGDMVPFSAFATG+WEYGSPRLERFNGLPA+NIQGATAPGFSTGAAM IM
Sbjct: 781  DLDTWYVRNNKGDMVPFSAFATGAWEYGSPRLERFNGLPAMNIQGATAPGFSTGAAMNIM 840

Query: 841  EDLVKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV 900
            ED+VKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV
Sbjct: 841  EDMVKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV 900

Query: 901  VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLVEATL 960
            VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGL+EATL
Sbjct: 901  VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLIEATL 960

Query: 961  HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF 1020
            HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF
Sbjct: 961  HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF 1020

Query: 1021 FVIVERIFSKRERKAKEKNPTSTD 1044
            FVIVERIFSKRE+K KE+ PTS +
Sbjct: 1021 FVIVERIFSKREKKGKEEKPTSAE 1044