Pairwise Alignments

Query, 335 a.a., NAD dependent epimerase/dehydratase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 342 a.a., NAD-dependent epimerase/dehydratase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  148 bits (374), Expect = 2e-40
 Identities = 102/338 (30%), Positives = 164/338 (48%), Gaps = 29/338 (8%)

Query: 3   YLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLAR-LAPLEALSNFHFIKLD 61
           +LVTG AGFIG+N+ + L   G +VVG+DN    Y   L + R +   +   NF F + D
Sbjct: 18  WLVTGVAGFIGSNLLETLLMHGQKVVGLDNFATGYQRNLDMVREIVGADLWRNFRFKEGD 77

Query: 62  LADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEH 121
           + + E   ++   +G   V+H AA   V  S+++P+   +SN+ G + ++   R  K++ 
Sbjct: 78  IRNLEHCREVC--EGVDHVLHQAALGSVPRSIEDPILANESNISGFVNMMVAARDAKVKT 135

Query: 122 LVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFT 181
            VYA+SSS YG    +P   ED +  P+S YA TK  NEL +  ++  Y +   GLR+F 
Sbjct: 136 FVYAASSSTYGDEPTLP-KVEDKIGKPLSPYAVTKYVNELYADVFATCYGMKAIGLRYFN 194

Query: 182 VYG----PWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDKPPS 237
           V+G    P+G     + ++  ++L GET+ +   G+ SRDF YID+ V+           
Sbjct: 195 VFGKRQDPFGAYAAVIPQWFASLLRGETVFINGDGETSRDFCYIDNCVQA---------- 244

Query: 238 PTPDWRVETGTPANSSAPYRVFNIGNGSPV---QLLDFI---TALERALGIEAKKQFLPM 291
                 +   T  + +A   V+N+  G      QL D I    +  +     AK +    
Sbjct: 245 -----NLLAATATDEAALNTVYNVAFGERTDLNQLFDLIREEVSRHKPEAATAKPEHREF 299

Query: 292 QPGDVHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWY 329
           + GDV  + AD       +GY+    +  G+    DWY
Sbjct: 300 RFGDVRHSLADISRAHTRLGYEPVYSVRQGLRLSGDWY 337