Pairwise Alignments

Query, 335 a.a., NAD dependent epimerase/dehydratase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 347 a.a., UDP-glucose 4-epimerase from Herbaspirillum seropedicae SmR1

 Score =  136 bits (342), Expect = 9e-37
 Identities = 97/340 (28%), Positives = 161/340 (47%), Gaps = 32/340 (9%)

Query: 2   KYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARL-APLEALSNFHFIKL 60
           ++L+TG AGFIG+N+  RL  +G +V G+DN +      L+  R      A +NF FI+ 
Sbjct: 17  RWLITGVAGFIGSNLLARLLTLGQQVTGLDNFSTGRQANLEEVRAEVGAAAWANFRFIEG 76

Query: 61  DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120
           D+ D      L A  G   V+H AA   V  S+++P+    +N+ G L +L   R   + 
Sbjct: 77  DICD--AATCLRACDGADYVLHQAALGSVSRSIEDPVRTNLNNVNGFLNMLVAARDAGVA 134

Query: 121 HLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFF 180
             VYA+SSS YG +  +P   E+ +  P+S YA TK  NEL +  ++  Y + + GLR+F
Sbjct: 135 RFVYAASSSTYGDHPGLP-KVEEVIGKPLSPYAVTKYVNELYAEVFARCYGMESIGLRYF 193

Query: 181 TVYG----PWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDKPP 236
            V+G    P G     + ++  A++    + +   G  SRDF YID++V+  +       
Sbjct: 194 NVFGRRQDPHGAYAAVIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANL------- 246

Query: 237 SPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGI-------EAKKQFL 289
                        A   A  +V+N+       L D + A+ R L +       E +  ++
Sbjct: 247 ---------LAATAGEEAVNQVYNVALNDRTSLND-LYAMMRELLVQRFPHLQEHRPSYV 296

Query: 290 PMQPGDVHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWY 329
             + GD+  + AD     + +GY     +  G+ + + WY
Sbjct: 297 GFRAGDIRDSQADIGKARQRLGYAPTHRLRAGLEQAMSWY 336