Pairwise Alignments

Query, 283 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., sulfate ABC transporter permease subunit CysW from Dyella japonica UNC79MFTsu3.2

 Score =  288 bits (737), Expect = 1e-82
 Identities = 144/262 (54%), Positives = 188/262 (71%), Gaps = 3/262 (1%)

Query: 17  WIKWSLIGLALSFLALFLVLPLAVVLYGAFEAGINVWWQAITDPDALAAIRLTLLVLIIV 76
           W    LI LAL  + + LVLPL  V   AF  G  V+  A+TDPDALAA+RLTL V  I 
Sbjct: 20  WRHALLIALALLCVGVLLVLPLLAVFAEAFAKGWAVFAAAVTDPDALAAVRLTLTVAAIA 79

Query: 77  VPTNAIFGVAIAWAIAKFEFRGKTLLISIIDMPFAISPVVVGLIFVILFGAQGWFGPWLA 136
           VP N +FG+A AW +   +FRGK LL ++ID+PF++SPVV GL+ V+++G  GWFG WL 
Sbjct: 80  VPANTVFGLAAAWLLTHHQFRGKALLGALIDLPFSVSPVVAGLVCVLVYGVHGWFGGWLE 139

Query: 137 AHDLKVIFAVPGIIIVIMFGTLPFVARELIPLMQQQGKDEEEASLTLGANGLKTFWYVTL 196
           AH L+VIFA PG+++  +F   PFVARELIPLMQ QG DEE A+ TLGA G + F+ VTL
Sbjct: 140 AHGLRVIFAWPGLVLATVFVAFPFVARELIPLMQAQGSDEELAARTLGAGGWQIFFRVTL 199

Query: 197 PNIKWGLLYGVILCNARAMGEFGAVAVVSGRIRGETNTMPLHIEVLYN---EYMFTAAFA 253
           P I+W LLYGV+LC AR+MGEFGAV+VVSG + G TNT+PL ++ +YN   +    +AFA
Sbjct: 200 PRIRWALLYGVLLCTARSMGEFGAVSVVSGHLPGLTNTLPLQVDQVYNGGSDTAIASAFA 259

Query: 254 VSSLLTGLALVTIVLKSMVEWK 275
           ++SLL  L LVT++ K ++EW+
Sbjct: 260 LASLLACLGLVTLLAKRLMEWR 281