Pairwise Alignments

Query, 486 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 441 a.a., hypothetical protein from Paraburkholderia graminis OAS925

 Score =  153 bits (387), Expect = 1e-41
 Identities = 101/304 (33%), Positives = 151/304 (49%), Gaps = 28/304 (9%)

Query: 11  VLSAALVTLPFTTPTQAAGVSVSQGSSASLSQAELEQMLAPIALYPDSLLSHILIASTYP 70
           +L+   V L   TP   A       ++A +S  +L+ + APIALYPD+LL+ +L+A+T+P
Sbjct: 17  ILAGLPVMLDVATPAAHAQ------TAAKISSQQLDSLTAPIALYPDALLAQVLMATTFP 70

Query: 71  LELVQAQRWLEDHPKLSVEQVMSRTEDKGWDPSVKALMAFPNVLQKMSEDLDWTQRLGEA 130
            E+  A  W + +P    +  +     + WDPSV++L+AFP VL  M+   DW  +LG A
Sbjct: 71  QEVTSAAAWSKANPNSKGDDAVRAVAAEPWDPSVQSLVAFPQVLATMASKPDWVAQLGNA 130

Query: 131 FLANEGQVMDGIQSLRQQADKANSLANMDNMAVTRANNQIIIEPVRREVVYVPYYDPRVV 190
           FLA    VMD +Q LR+QA  A +L   +   V    + I I PV  +VVYVP Y+P VV
Sbjct: 131 FLAQPNDVMDSVQRLRKQAQTAGNLKTTEQQKVIVEQSTIQIVPVNPQVVYVPTYNPTVV 190

Query: 191 YGTWRWGVAYPPVYWQFGGYVGNPYRPSHSY-------FYWSPGIHISFNYFFSSFHWHR 243
           YG W +  AYPPVY         P  P ++          +  GI I+ +  +S  +W+ 
Sbjct: 191 YGVWPY-PAYPPVY--------VPPPPGYAVASGLAAGLAFGVGIAIT-SALWSDVNWNN 240

Query: 244 HKVVVIDHHHSHHYRPRERYSVSHGAQPWKHKPEHRRGVAYHHPVVKERYYSDSKYRGRD 303
           H  V I+ +  ++     R  V+     W       R  + +     +R      YRGRD
Sbjct: 241 HN-VNINVNRYNNINVNRRLDVNSNTTRWNRDTTFNRNASANIGGGVQR----DAYRGRD 295

Query: 304 SHSS 307
             +S
Sbjct: 296 VSTS 299