Pairwise Alignments

Query, 486 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 501 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  826 bits (2134), Expect = 0.0
 Identities = 401/489 (82%), Positives = 431/489 (88%), Gaps = 16/489 (3%)

Query: 1   MNRLHRWNWLVLSAALVTLPFTTPTQAAGVSVSQGSSASLSQAELEQMLAPIALYPDSLL 60
           MNRLHRW WLVLSAAL+TLPFT+PTQA GVSVSQGSSASLSQAELEQMLAPIALYPDSLL
Sbjct: 1   MNRLHRWKWLVLSAALMTLPFTSPTQAEGVSVSQGSSASLSQAELEQMLAPIALYPDSLL 60

Query: 61  SHILIASTYPLELVQAQRWLEDHPKLSVEQVMSRTEDKGWDPSVKALMAFPNVLQKMSED 120
           SHILIASTYPLE+VQAQRWLED+PKLS ++VMSRTEDK WDPSVKALMAFPNVL+KMSED
Sbjct: 61  SHILIASTYPLEVVQAQRWLEDNPKLSTDEVMSRTEDKDWDPSVKALMAFPNVLEKMSED 120

Query: 121 LDWTQRLGEAFLANEGQVMDGIQSLRQQADKANSLANMDNMAVTRANNQIIIEPVRREVV 180
           LDWTQ+LGEAFLA+EGQVMDGIQSLRQQADKANSLANM NMAVTRANNQIIIEP RREVV
Sbjct: 121 LDWTQKLGEAFLADEGQVMDGIQSLRQQADKANSLANMGNMAVTRANNQIIIEPARREVV 180

Query: 181 YVPYYDPRVVYGTWRWGVAYPPVYWQFGGYVGNPYRPSHSYFYWSPGIHISFNYFFSSFH 240
           YVPYYDPRVVYGTWRWGVAYPPVYW+FGGYVG PYRPSHSYFYWSPGIHISFNYFFSSFH
Sbjct: 181 YVPYYDPRVVYGTWRWGVAYPPVYWEFGGYVGYPYRPSHSYFYWSPGIHISFNYFFSSFH 240

Query: 241 WHRHKVVVIDHHHSHHYRPRERYSVSHGAQPWKHKPEHRRGVAYHHPVVKERYYSDSKYR 300
           WH H+VVV+DH HSHHYRPRERYSVS+GAQPWKHKPEHRRGV YH+PVVKERYY D+K+R
Sbjct: 241 WHSHRVVVVDHRHSHHYRPRERYSVSYGAQPWKHKPEHRRGVVYHNPVVKERYYGDNKFR 300

Query: 301 GRDSHSSGSGQHFTSQYAKSREHQDTRDNRDNQRDDKRHDKDRG------NQYSRERTPN 354
           GRDSHS+GSGQHFTSQY+KSREHQD R NRDN+  DKR DKDRG      N YSRERTP+
Sbjct: 301 GRDSHSTGSGQHFTSQYSKSREHQDARYNRDNKNYDKRQDKDRGNNASRDNHYSRERTPS 360

Query: 355 LQHTQAELKERRATPMDSSQTHRENYQREHRQKERNDNGRHDNQVRQNQAKTMREQTNDT 414
            Q+TQAELKERR  P +S+Q ++E Y+R     ERNDN R+DNQVRQ QAK  REQ  ++
Sbjct: 361 YQNTQAELKERRVAPTNSTQANKEGYKR-----ERNDNARNDNQVRQMQAKATREQAKES 415

Query: 415 WQRQYQQREYQSSDQQPRHVETRAQPQRHEARPEVRRPEPQRIEQPRQAQPRQREEVRTR 474
            QRQYQ RE     QQPR VETR QPQR EARPEVRR EPQRIEQPRQ QPRQREE R R
Sbjct: 416 PQRQYQTRE-----QQPRSVETRTQPQRQEARPEVRRAEPQRIEQPRQVQPRQREETRVR 470

Query: 475 PSESRQHTQ 483
             E RQ+ Q
Sbjct: 471 QGEPRQNMQ 479