Pairwise Alignments

Query, 455 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 446 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

 Score =  327 bits (837), Expect = 6e-94
 Identities = 183/438 (41%), Positives = 273/438 (62%), Gaps = 10/438 (2%)

Query: 6   STALALLFNGTKNRQLFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTII 65
           ST L    + + +R+++ALA PMILSNI+VPL+ LVD+AVIGHL  A+ LG VA+G+T+ 
Sbjct: 2   STLLTDWRHRSTHRRVWALATPMILSNISVPLVALVDSAVIGHLPHAHQLGAVAVGATLY 61

Query: 66  TLIIWLLGFLRMATTGLVAQAYGANDINAQLKLLVQGAMLATGLGIAMILLQVPLLSLAL 125
           T + W++GFLRM TTG  AQA G +D  A  ++L+QG +LA GL + + ++ +P   LAL
Sbjct: 62  TFLAWVMGFLRMGTTGFAAQAAGRSDSAALRRILLQGLLLAVGLALLLGVIALPFSHLAL 121

Query: 126 SFSEASVEVERYCREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIIL 185
           +  + S ++++   ++F  R++  P AL +  ++GW LG Q  +A +  L+  N  NI+L
Sbjct: 122 TMMQPSADLQQMTLDFFHTRLFGLPAALASYALVGWFLGAQNARAPLAILLVTNAVNIVL 181

Query: 186 DVLFVLGFGWGVKGAALASVFADITAFSVALYMVLQQVKLIP-NYPFAEIRAHIRFTGFG 244
           ++ FV+G  WGV G+A ASV A+ T   + L +    ++  P    ++ +R    ++ + 
Sbjct: 182 NLWFVMGLDWGVVGSARASVLAEWTGVVLGLLLARNTLRAWPGRIVWSALRL---WSNWR 238

Query: 245 QLLRLNSDIFIRSLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAE 304
            LL +N DIF+R+L LQ+    +T  GA LGD TVAANA+LLN LLL ++ALDG+A+  E
Sbjct: 239 PLLAVNRDIFLRTLALQSVMFLITVQGARLGDATVAANALLLNGLLLTAHALDGLAHAVE 298

Query: 305 AEVGKAYGQKRAQQLHEAVVLAWCWSAITALGFTLIFSLWGSHIIELLTSIDEVRTTAQI 364
           A  G A G +    L  ++V+A  WS I+++ F L F + G   + L T I EVR TA +
Sbjct: 299 ALCGHAIGARDRDTLRRSLVVAGGWSLISSVVFALFFLVAGQGFVSLQTDIPEVRATAMM 358

Query: 365 YLIWLVLLPLWSFSSYLFDGVYIGAAQGKVMRNSMIIATFGAFFPTWYLLQSLLPSEQAN 424
           YL +L L+PL +  SYL DG++IGA + + MRN+M+ +  G   P  Y     L S   N
Sbjct: 359 YLPYLALMPLLAVWSYLLDGLFIGATRAREMRNAMLFSAAG-IAPLAY-----LASSHGN 412

Query: 425 HALWAAMTAFMLMRSLTL 442
           HALW    AF L+R L+L
Sbjct: 413 HALWLTFLAFTLLRGLSL 430