Pairwise Alignments

Query, 455 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 440 a.a., MATE family efflux transporter from Rhodopseudomonas palustris CGA009

 Score =  245 bits (626), Expect = 2e-69
 Identities = 150/430 (34%), Positives = 231/430 (53%), Gaps = 13/430 (3%)

Query: 19  RQLFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRMA 78
           RQ+FA+A P +++N+T PLLG+V T  IG L +A  LGGV++ S +   + WL GFLRM+
Sbjct: 11  RQVFAIAGPAMVANLTTPLLGVVATTAIGRLGEATLLGGVSMASVLFDCLFWLFGFLRMS 70

Query: 79  TTGLVAQAYGANDINAQLKLLVQGAMLATGLGIAMILLQVPLLSLALSFSEASVEVERYC 138
           T    AQA GA         L++G ++A G+G+ +I LQ PL ++ +     S  V    
Sbjct: 71  TLAFTAQALGAGQSREVPAHLLRGLIVAAGIGLLLIALQGPLATVLIGAMGGSEAVSAAA 130

Query: 139 REYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVLGFGWGVK 198
           + YF IRIWS+P  L N  +LGWL+G+ +   A+   I  N+ NI   VL VL F +GV 
Sbjct: 131 KTYFSIRIWSSPLVLANFAVLGWLVGQARATLALAVQIAINLINIAATVLLVLWFDFGVA 190

Query: 199 GAALASVFADITAFSVALYMVLQQVKLIPNYPFAEIRAHIRFT--GFGQLLRLNSDIFIR 256
           GAA+A+V A+ +   + L +   +      +   ++   + F      ++  +N DI IR
Sbjct: 191 GAAIAAVIAEGSGLVIGLAIAAWR-----GHGLFKVSRAMLFDPHRLRRMFAVNRDIMIR 245

Query: 257 SLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAEVGKAYGQKRA 316
           +  L   F F T  GA  GD  +A NAVL N L++ ++ LDG+A  AE   G+  G +  
Sbjct: 246 TAALIAVFLFFTAQGARGGDVVLATNAVLNNFLMISAFFLDGLANAAEQLCGRTLGARDR 305

Query: 317 QQLHEAVVLAWCWSAITALGFTLIFSLWGSHIIELLTSIDEVRTTAQIYLIWLVLLPLWS 376
               +A  L   W    AL  + I++  G  +I+ +TS DE+R +A+ YL  + L P+  
Sbjct: 306 AGFVKATRLVILWGFGFALIVSAIYAFAGPALIDFITSNDELRRSARDYLWLVTLAPMLG 365

Query: 377 FSSYLFDGVYIGAAQGKVMRNSMIIATFGAFFPTWYLLQSLLPSEQANHALWAAMTAFML 436
             ++ +DGV+IGA   + MRN M+++    F  +W+ L+ L      N  LW A+ +  +
Sbjct: 366 VFAFAYDGVFIGATWAREMRNLMLLSLV-LFLLSWFALRPL-----GNTGLWIALLSHYV 419

Query: 437 MRSLTLAAHY 446
            R    A  Y
Sbjct: 420 WRGGLQALRY 429