Pairwise Alignments

Query, 455 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., MATE family efflux transporter from Dyella japonica UNC79MFTsu3.2

 Score =  284 bits (726), Expect = 5e-81
 Identities = 174/426 (40%), Positives = 245/426 (57%), Gaps = 10/426 (2%)

Query: 18  NRQLFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRM 77
           +R+++ALA+PMILSN+TVPL+ LVD+ V GHL     LG VA+GS I  L +W LGFLRM
Sbjct: 14  HRRVWALAVPMILSNLTVPLVALVDSTVAGHLPQTQDLGAVAVGSAIYALPVWSLGFLRM 73

Query: 78  ATTGLVAQAYGANDINAQLKLLVQGAMLATGLGIAMILLQVPLLSLALSFSEASVEVERY 137
            TTG  AQA GA D  A   + VQ  +LA   GI + LL +PLL   +    A+  +   
Sbjct: 74  GTTGFAAQAEGAGDRIALRTVQVQALLLAAVFGIGVGLLMLPLLPWLIGQMHATPALAAR 133

Query: 138 CREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVLGFGWGV 197
             +Y  +R+   P ALLN  + GW +G Q+ +  +  L+ AN+ NI L++LFV GFGWGV
Sbjct: 134 GLDYLHLRLLGLPAALLNYALAGWFIGAQRARTTLSLLLVANLVNIALNLLFVPGFGWGV 193

Query: 198 KGAALASVFADITAFSVALYMVLQQVKLIPNYP-FAEIRAHIRFTGFGQLLRLNSDIFIR 256
            G ALAS   +   +  ALY +    + +  +P   + +A   +  +  LL +N DIFIR
Sbjct: 194 PGIALASACGE---WCGALYGLWCARRAVHGWPGRVDWQAMRGWAHWRPLLMVNRDIFIR 250

Query: 257 SLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAEVGKAYGQKRA 316
           +L L+  F  ++  GA LGD TVAANA+LLN L+L ++ LDG+A   EA  G A G +  
Sbjct: 251 TLALEGVFFSISLLGARLGDATVAANALLLNGLMLTAFGLDGLANAVEALCGHAIGARDP 310

Query: 317 QQLHEAVVLAWCWSAITALGFTLIFSLWGSHIIELLTSIDEVRTTAQIYLIWLVLLPLWS 376
             L  A+V+A  WS + ++   L+F+  G   + + TS+ EVR  A   L WL  LP+ S
Sbjct: 311 LALRRALVVAGGWSLLGSVACALLFAGAGHLFVNVQTSLPEVRAVAYGALPWLAALPVVS 370

Query: 377 FSSYLFDGVYIGAAQGKVMRNSMIIATFGAFFPTWYLLQSLLPSEQANHALWAAMTAFML 436
             SYL DG++IGA +G+ MR+ M++A         + L +       N  LW A  AFM 
Sbjct: 371 VWSYLLDGLFIGATRGREMRDGMLVAV------ALFALLAWAARGWGNDGLWLAFLAFMA 424

Query: 437 MRSLTL 442
           +R   L
Sbjct: 425 VRGAGL 430