Pairwise Alignments

Query, 455 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 439 a.a., MATE efflux family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  315 bits (806), Expect = 2e-90
 Identities = 177/429 (41%), Positives = 253/429 (58%), Gaps = 8/429 (1%)

Query: 18  NRQLFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRM 77
           +R++  +A+P++LSN TVP+LG VDT V+G + +A  +G V +G+ I+T I W+ GFLRM
Sbjct: 12  HRRVLHIAVPIVLSNATVPILGAVDTGVVGQMGEAAPIGAVGIGAIILTAIYWIFGFLRM 71

Query: 78  ATTGLVAQAYGANDINAQLKLLVQGAMLATGLGIAMILLQVPLLSLALSFSEASVEVERY 137
            T+GLVAQA GA D +    LL +  M+  G G+A+I LQ  L   A   S AS EVE  
Sbjct: 72  GTSGLVAQALGAEDRDEVSALLTRALMIGFGAGLALIALQSALFWGAFQLSPASAEVETL 131

Query: 138 CREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVLGFGWGV 197
            REY  IRIWS P A+    + GWL+  ++ +  +   ++ N  NI LD+ FVLG GWGV
Sbjct: 132 AREYMAIRIWSAPAAIAIYGLTGWLIAAERTRGVLVLQLWMNGLNIGLDLWFVLGLGWGV 191

Query: 198 KGAALASVFADITAFSVALYMVLQQVKLIPNYPFAEIRAHIRFTGFGQLLRLNSDIFIRS 257
            G A A+  A+ TA  + L++             A + A  R     ++  +NSDI IRS
Sbjct: 192 PGVAFATFLAEWTALGLGLWLCRDAFGRPAWRDRALVFARARLL---RMASVNSDILIRS 248

Query: 258 LCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAEVGKAYGQKRAQ 317
           + LQ AF    F GA LGD T+AAN VLL  L + +YALDG A+ AEA VG+A+G     
Sbjct: 249 VLLQAAFVSFLFLGADLGDVTLAANQVLLQFLHVTAYALDGFAFAAEALVGQAFGAGAVD 308

Query: 318 QLHEAVVLAWCWSAITALGFTLIFSLWGSHIIELLTSIDEVRTTAQIYLIWLVLLPLWSF 377
           +L    +L   W  IT +   L F+L G  +I+L+T+ +EVR  A+ YL W+V  PL   
Sbjct: 309 RLRRGALLTSVWGGITCVALALGFALAGPWVIDLMTTAEEVRAVARSYLPWMVAAPLLGV 368

Query: 378 SSYLFDGVYIGAAQGKVMRNSMIIATFGAFFPTWYLLQSLLPSEQANHALWAAMTAFMLM 437
           ++++ DG++IGA + K MRN M++ +F A+     +L  L      NH LWAA+    ++
Sbjct: 369 AAWMLDGIFIGATRTKDMRNMMVL-SFAAYAAAVAVLLPLF----GNHGLWAALMVMFVV 423

Query: 438 RSLTLAAHY 446
           R++TLA  Y
Sbjct: 424 RAVTLALRY 432