Pairwise Alignments

Query, 455 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 459 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 115/450 (25%), Positives = 184/450 (40%), Gaps = 27/450 (6%)

Query: 14  NGTKNRQLFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLG 73
           +G + ++L  LALP++++ +T  ++G +DT + G +S A  +  VA+G+++    I  + 
Sbjct: 4   SGFQAKRLIQLALPVLIAQVTQTMMGFIDTVMAGRVS-AVDMAAVAVGTSLWLPAILFVQ 62

Query: 74  FLRMATTGLVAQAYGANDINAQLKLLVQGAMLAT--GLGIAMILLQVPLLSLALSFSEAS 131
            L MA T L A   GAN+  A   L  QGA LA   GLG+   L   PL+   LS     
Sbjct: 63  GLLMAFTPLFAHHNGANNQKAIQPLAFQGAYLALIGGLGVMAFLASAPLV---LSHMNLE 119

Query: 132 VEVERYCREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVL 191
            ++      Y    +W  P  +L  V+ G   G       M         NI  + +F+ 
Sbjct: 120 PQLYNLTIGYIDGILWGAPAFVLYQVLRGCSEGISYTLPTMIIGFVGLAVNIPANYIFIY 179

Query: 192 G-FGWGVKGAALASVFADIT----AFSVALYMVLQQVKLIPNYPFAEIRAHIRFTGFGQL 246
           G FG    G A   V   +       ++ +YM L + K     PF++      F    ++
Sbjct: 180 GHFGMPAMGGAGCGVATALVFWAMLIAMTIYMQLHK-KFAALAPFSQFH-RPDFATMKKM 237

Query: 247 LRLNSDIFIRSLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAE 306
            +L   I +      + FA +    A LG   VA++ + LN   ++      I       
Sbjct: 238 TKLGMPIAMALFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIR 297

Query: 307 VGKAYGQKRAQQLHEAVVLAWCWSAIT-ALGFTLIFSLWGSHIIELLTSIDEVRTTAQIY 365
           +G   G+ RA  +   V     W A++ AL   ++  L+   I EL  S  EV   A   
Sbjct: 298 IGYYLGRDRA-DISAVVAKVGLWLALSLALSTAILTVLFRFQIAELYNSDPEVVVLAGSL 356

Query: 366 LIWLVLLPLWSFSSYLFDGVYIGAAQG-KVMRNSMIIATF---GAFFPTWYLL---QSLL 418
           ++   L  L    S     V  GA +G K  R++  I  F   G      Y L     ++
Sbjct: 357 MLMAALYQL----SDSIQVVAAGALRGYKDTRSAFYITLFSYWGIGMTLGYTLAYTDFIV 412

Query: 419 PSEQANHALWAAMTAFMLMRSLTLAAHYRF 448
           P+  A H  W  + A +   +L      R+
Sbjct: 413 PAMGA-HGFWTGLIAGLTSAALLFFIRLRY 441