Pairwise Alignments

Query, 313 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., DUF4424 domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  136 bits (343), Expect = 6e-37
 Identities = 109/333 (32%), Positives = 150/333 (45%), Gaps = 41/333 (12%)

Query: 9   AYSITALLFSTSAFANDSSFGDANGSITLKYQPHISMDKESLFISEAEVRVDYVFTNTSS 68
           A ++  L     A AND++     G +  +    I M  E L IS   + V Y F N S 
Sbjct: 11  AVAVALLTCCLPARANDTTAALTTGGLEFRTNADIEMLSEDLSISRERIDVRYRFLNRSG 70

Query: 69  QDLIVPIAFPMPPMFFGSA--------DHSSIDNFTLKVNGKTQPTQHRLVAQLADKTDI 120
            D  V +AFPMP + F  A        D  +  NF  KV+G+    Q    A L DKTD+
Sbjct: 71  ADQHVTVAFPMPEIDFSDASNIDVPNNDSDNFLNFRTKVDGREVTAQLEQKA-LVDKTDV 129

Query: 121 SAELKQLGWGIDEVAYFAEYAEVPEGKPALPQQWLDEDQQI-----------------AF 163
           +A LK LG  +   A   +   V E  PA  QQ L +D+ I                 ++
Sbjct: 130 TARLKALGVPLQPRAKATQ--TVLEALPAQTQQQLLKDEIIRPDDYDAGKGMEHHLAPSW 187

Query: 164 TLSDYFVWEQTFPAGQSVSISHSYTP----SLSTGIPD--TANSIIDTYTELACLDESAK 217
            L   + W+QTFPAG  + + HSYTP    S+ TGI    T       Y    C + S  
Sbjct: 188 RLRATYYWDQTFPAGSELVVEHSYTPSVGGSVQTGITGQYTTAEQRKNYVHKFCTEPSFV 247

Query: 218 QGIRKRNLVVKQDGEDVEYGVEWSHLSYILVTANNWQGAIKDFKLTIKKSQPTDLISLCF 277
             +     + +++G           +SY+L T  NW   I DF LTI K +P+ L+SLC 
Sbjct: 248 TAVA---AMTRKNGNQPP---PEQRVSYVLTTGANWAKPIGDFHLTIDKGKPSSLVSLCE 301

Query: 278 DGELKKTDPLTFEFQQKQFTPTQDLSILFIRKP 310
            G + KT P  FE ++  F P++DL IL I  P
Sbjct: 302 TG-VVKTGPTRFEVRKTNFKPSRDLDILIIDAP 333