Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

 Score =  286 bits (731), Expect = 3e-81
 Identities = 203/700 (29%), Positives = 335/700 (47%), Gaps = 45/700 (6%)

Query: 4   KAFKKSTIAAIVSSLLISS-AYAAADAESSEPIER--ITVYGEKIERSLKDTTSSISVID 60
           K FK  T++A++  L   S AYA     S++  E   + V GEK +RS+ +T++S+ V D
Sbjct: 15  KKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFD 74

Query: 61  KETLD-SGQYQSTSSALSEVPNVVVL--SGSVPDIRGVSGNGSASGFNSFTGGARARVST 117
           ++T++ +         L  +PN+V    S ++P IRG+ G+G + G  +   G   R++ 
Sbjct: 75  QDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLNM 134

Query: 118 LVDGVAEPFVADLSGDTGLWDIQQIEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQGAA 177
            +DG +  +     G   LWD+QQ+E++ GPQS I GRN+  G + +K+ DPT  ++ A 
Sbjct: 135 SIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAV 194

Query: 178 RVGYRDQDNFIDSAVMLSGPILDDELAFRVSGQNVTGETYNKGLEYPTNPATFDQNELIT 237
           + G  + D +  +A M+S PI+ DELAFR+S      +++   ++        D  ++  
Sbjct: 195 KAGIGESD-YSQTAGMISAPIIQDELAFRLSFDQQKRDSF---VDLAAFEPAGDPKKIEM 250

Query: 238 NRWRGKFLWQPSAIEDLKVLYSLSYNDEKGDSGRNYFTGDDPWAYKPIFQRYIETKSTTH 297
           N  RGK L++PSA++  K   +LS+ D +G    N     +  A++P++    ET S T 
Sbjct: 251 NSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNE-AFRPVY----ETASFTT 305

Query: 298 SVKVDYELGEGQAFDLIVAYMDYNWGFESYEALATAQQYVDMK--DKSYTVDGKYSFGLK 355
           +  + + L +   F+  + Y D+     SY+         D     K + ++    +   
Sbjct: 306 AWDIIWHLNDLFTFENNLVYADF-----SYDRYTNPNSRGDFNTDGKEFHIEPLLRYIAL 360

Query: 356 DKDFNGFVGLAYFKRSQ-DFGSTGSSIYSGDDSTKSASVYGEVTYGLADSLWITVGGRVM 414
           D   N  +G  Y++ SQ D     +S Y  D  TK+ SV+ EVTY L  S+ + + GR  
Sbjct: 361 DGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVFAEVTYALTPSINVNLAGRFE 420

Query: 415 REEQLRNFTMLYQGSQLLEKLDDANTVTLPKLVLQYALNDNTTLAASVRRGYNSGGGALS 474
           RE+  RN +      +     D+ ++V LPKL + Y      T      +GYN+ G  L+
Sbjct: 421 REQVKRNVS----HPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLA 476

Query: 475 LVESEY-----YYYDEEFVNTYELSSRSAFANGDVNLSANLFYNDFDGYQASNSARK--- 526
               ++     Y +++E +  YE  +R  F++  V +  NLFYNDFD  Q + +      
Sbjct: 477 FNSMQFTGFRPYEFEQESIWNYEFYTRHRFSH-SVEVLTNLFYNDFDSMQMTQTTSSGDV 535

Query: 527 -ITNIDKAVSYGVEAEFSAMLTENWQFISGVGLLDSEIKQADPSYGDIIGNQLNSAPHVT 585
            I N+D+A +YG E       T + +  + +GLL +E K+   +       +L  AP ++
Sbjct: 536 FIANLDEASTYGAEIGSRWYATSSLELFANLGLLKTEFKETTGN-----TKELPRAPKMS 590

Query: 586 ANAGLKYWLSDAFSFGFAGHYVGEYFADINNTESRVAGDYVVARVSLDYQTDSWRVSGFV 645
           AN GL Y     F F     Y G YF++  N+E      Y VA   L Y  +  R + + 
Sbjct: 591 ANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEHGRATLYA 650

Query: 646 NNLFDEQAMTVNEPASRSYPDGYAAIIDPRNIGVSAMYRF 685
            NL D    T+    + +          PR IG S    F
Sbjct: 651 TNLLDSDKTTLYLSTNNTLDQ---LKQQPRMIGASVQLNF 687