Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 755 a.a., TonB-dependent receptor:TonB box, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 94.7 bits (234), Expect = 1e-23
 Identities = 155/705 (21%), Positives = 283/705 (40%), Gaps = 109/705 (15%)

Query: 25  AAADAESSEPIERITVYGEKIERSLKDTTSSISVIDKETLDSGQYQSTSSALSEVPNVVV 84
           AA     +  +E +TV   + E SL+    ++SVI+ E L+       +S + +VP++  
Sbjct: 49  AAGQNTETVALESVTVTATRREESLQKVPVAVSVIEGEQLERDNRNGVASIVQQVPSLNF 108

Query: 85  LSGSVPD-----IRGVSGNGSASGFNSFTGGARARVSTLVDGV--AEPFVADLSGDTGLW 137
            +G+        +RGV       G  S + G    V+T++DGV  A P  A L     L 
Sbjct: 109 RTGASNKDTSLFVRGV-------GTISTSPGVEPTVATVIDGVVYARPGQATLD----LL 157

Query: 138 DIQQIEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQGAARVGYRDQDNF---------- 187
           D+++IEV RGPQ T+ G+N+  G + + T+ PT      A  GY DQ  +          
Sbjct: 158 DLERIEVLRGPQGTLFGKNASAGVLNVTTKAPT-----EATHGYIDQSYYSGNESRTRFG 212

Query: 188 IDSAVM---LSGPI------LDDELAFRVSGQNVTGETYNKGLEYPTNPATFDQNELITN 238
           I  +++   L G I       D  +  +++GQ V G  YN+  +       F  N+ IT 
Sbjct: 213 IGGSLIPQTLKGSITTLFGSYDGNVDNKLNGQEVNG--YNR--KGARGKLEFTPNDDITF 268

Query: 239 RWRGKFLWQ----PSAI--EDLKVLYSLSYNDEKGDSGRNYFTGDDPWAYKPIFQRYIET 292
                ++      P+ +  + L   ++ +    + DS       D        ++ ++E 
Sbjct: 269 TLAADYMQSHDDAPNGVVTKALTPSFASALTPVRADSDNRNVVSD--------YRSHVED 320

Query: 293 KSTTHSVKVDYELGEGQAFDLIVAYMDY-NWGFESYEALAT-AQQYVDMKDKSYTVDGKY 350
            +   S ++D++LG+      I A+  + N  ++  + L T    +   +DK      +Y
Sbjct: 321 VNKGLSGQLDWQLGD-YTLTSITAWRGWDNTQYQDGDRLGTVTAAFPGTEDKGDLAFNQY 379

Query: 351 SFGLKDKDFNG----FVGLAYF---KRSQDFGST---------GSSIYSGDDSTKSASVY 394
           S  L+     G    +VG  ++   K  + +  T         G + YS   +T S SV+
Sbjct: 380 SQELRLASPKGRFVEYVGGLFYMHGKSDETYQRTLITPTTHDRGIADYS--TTTDSYSVF 437

Query: 395 GEVTYGLADSLWITVGGRVMREEQLRNFTMLYQGSQLLEKLDDANTVT--------LPKL 446
           GE T+     L    G R   ++   +   +   +  +  +  A + +          +L
Sbjct: 438 GETTFNFTPDLRAIAGARWTHDDLEYDHRRVSTSATTVSGIQPATSSSGSVDEDGKSGRL 497

Query: 447 VLQYALNDNTTLAASVRRGYNSGGGAL--SLVESEYYYYDEEFVNTYELSSRSAFANGDV 504
            LQY L+D+     +  RGY      +  ++   +      E  NT+E+  ++   N  +
Sbjct: 498 GLQYDLSDSVMTYITYSRGYKGPAYNVFFNMQPRDTEALKPETSNTWEVGLKATTWNNRL 557

Query: 505 NLSANLFYNDFDGYQAS-------NSARKITNIDKAVSYGVEAEFSAMLTENWQFISGVG 557
             +  +F++++D YQA+           ++ N     + GVE +++   T N +F   + 
Sbjct: 558 TTNLAVFHSEYDNYQANFFDSVAGQVVTRLINAGSVSTEGVELDYALQATRNLKFSGALS 617

Query: 558 LLDSEIKQADPSYG-----DIIGNQLNSAP----HVTANAGLKYWLSDAFSFGFAGHYVG 608
              + I       G     ++ G  L  +P    +V A+  +          G    +  
Sbjct: 618 YTKARIDSFACPAGAAASCNVDGKTLPYSPDWKSYVRADYTIPLDNGLDIELGTDYSWQS 677

Query: 609 EYFADINNTESRVAGDYVV--ARVSLDYQTDSWRVSGFVNNLFDE 651
           E   DI+       G Y +  A V+L      WRV+    NL D+
Sbjct: 678 EVQYDISQNPDTRQGAYGIWNASVALADYNSGWRVALLGKNLADK 722