Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 719 a.a., TonB-dependent receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  234 bits (596), Expect = 1e-65
 Identities = 204/690 (29%), Positives = 319/690 (46%), Gaps = 54/690 (7%)

Query: 25  AAADAESSEPIERITVYGEKIERSLKDTTSSISVIDKETL-DSGQYQSTSSALSEVPNVV 83
           AA   + S  + ++ V GEKIER L+DT SS++++  E L D     S + A+++VPNV+
Sbjct: 55  AADPTQRSIVLPQMVVSGEKIERPLEDTASSVAILPAEDLEDKSGAASVADAIADVPNVL 114

Query: 84  VLSGSV--PDIRGVSGNGSASGFNSFTGGARARVSTLVDGVAEPFVADLSGDTGLWDIQQ 141
             +G+V  P IRG    G   G  +F GG   R +  +DG  + +   + G T +WD++ 
Sbjct: 115 Y-TGTVGAPIIRGQDTQGPNFGSTAFFGGTIPRATVNLDGHYQNYYEYVFGTTSIWDVES 173

Query: 142 IEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQGA--ARVGYRDQDNFIDSAVMLSGPIL 199
           +EVFRGPQ+T  G N+I G + + T+DPTF+ + +  A +G   +     +A+ LSGPI+
Sbjct: 174 VEVFRGPQTTSQGANAIAGAIIVNTKDPTFEPEASYLAEIGSYSRRR---TALALSGPII 230

Query: 200 DDELAFRV----SGQNVTGETYNKGLEYPTNPATFDQNELITNRWRGKFLWQPSAIEDL- 254
            D+LA R+    SG++   E  N    + T  A  D   L     RGK LW+P A+ DL 
Sbjct: 231 ADQLAARMAIDYSGRDTFVEYVNS--NFDTGDADLDFRSLTA---RGKLLWEPEALPDLT 285

Query: 255 -KVLYSL-SYNDEKGDS-GRNYFTGDDPWAYKPIFQRYIETKSTTHSVKVDYELGEGQAF 311
            K+ Y+  S N    +S  R Y   D+     P +    E ++ T    + Y        
Sbjct: 286 AKLTYAFGSANRPTWESASRPYDELDNATLSMPSW----EQRTHTGIADLSYAFANDITL 341

Query: 312 DLIVAYMDYNWGFESYEALATAQQYVDMKDKSYTVDGKYSFGLKDKDFNGFVGLAYFK-R 370
                Y D +      E        +D    S  +  + + G  +   +G  GL   + R
Sbjct: 342 FNQTQYSDTHVD-RVTEPANNGSAVIDQNTVSNEL--RLTLGDTESTLSGMTGLYLARTR 398

Query: 371 SQD-FGSTGSSIYSGDDSTKSASVYGEVTYGLADSLWITVGGRVMREEQLRNFTMLYQGS 429
           S+D     G S +  DD  + A ++ E+ Y L D   +T G R  R+  LR+ T  Y  +
Sbjct: 399 SKDTLHIRGLSRF--DDEKQHAGLFSEMAYRLTDRWTLTGGLRYQRDHILRSGTSSYART 456

Query: 430 QLLEKLDDANTVTLPKLVLQYALNDNTTLAASVRRGYNSGGGALSLVESEYYYYDEEFVN 489
            L    D++    LPK+ L Y +    T+ A V RGYN GG  LS   S+Y  ++ E V 
Sbjct: 457 AL--DYDESFDAWLPKVSLAYDVTPEVTVGALVNRGYNPGGVNLSFASSKYVTFEPETVW 514

Query: 490 TYELSSRSAFANGDVNLSANLFYNDF--------DGYQASNSARKITNIDKAVSYGVEAE 541
            YE+ SR+   +  + L+ NLFY+          D          + N DKA SYG+E  
Sbjct: 515 NYEVFSRAKLLDDRLILTGNLFYSRHSDSQRLLPDYLNGVQYGSVVVNADKAQSYGLELA 574

Query: 542 FSAMLTENWQFISGVGLLDSEIKQADPSYG-DIIGNQLNSAPHVTANAGLKYWLSDAFSF 600
               + ++ +  +G GLL + I     + G    GN+   AP  T + G+ + ++     
Sbjct: 575 VDYKMRDDLRVRAGAGLLKTRIGSFSNAEGTSYEGNEFGRAPSYTLSLGMDWDITPKVRL 634

Query: 601 GFAGHYVGEYFADINNTESRVAGDYVVARVSLDYQTDSW-RVSGFVNNLFDEQAMTVNEP 659
                +   Y++   N  +    +Y VA   + Y    +  V  F NN+FD++A     P
Sbjct: 635 SGEVKHTDGYYSTDENISAYAVENYTVANARIGYAPREYLEVYVFANNIFDKRA-----P 689

Query: 660 A----SRSYPDGYAAIIDPRNIGVSAMYRF 685
           A     RS     A +I+PR +G+     F
Sbjct: 690 AYLYDDRSAGGIVANMIEPRTVGIGVKGTF 719