Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 680 a.a., TonB-dependent receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  108 bits (271), Expect = 6e-28
 Identities = 158/681 (23%), Positives = 281/681 (41%), Gaps = 65/681 (9%)

Query: 35  IERITVYGEKIERSLKDTTSSISVIDKETLDSGQYQSTSSALSEVPNVVVLSGSVPDIRG 94
           +E +T+   K ++ + +   S+ V D + L+     + +      P +++ S        
Sbjct: 35  LESLTITANKRDQKINEVDGSVLVRDGKDLEKAHVTTVADLERVFPGLMIQSRGSRSY-- 92

Query: 95  VSGNGSASGFNSFTGGARARVSTLVDGVAEP---FVADLSGDTGLWDIQQIEVFRGPQST 151
              N S  G NS        +   VDGV +    F  +L       +++++E+ RGPQ T
Sbjct: 93  --ANFSLRGVNS-PDFYNPSIQVYVDGVPQDSTFFTQELV------NVERVELLRGPQGT 143

Query: 152 INGRNSIGGTVFIKTEDPTFDWQGAARVGYRDQDNFIDSAVMLSGPILDDELAFRVSGQN 211
           + G N+  G + I +  P    +G   VG        ++   L+GP++ D L   +S + 
Sbjct: 144 LYGGNAYAGVINIVSRKPDNAVKGM--VGGMVSTAGGETETSLAGPVVRDALYGGLSAK- 200

Query: 212 VTGETYNKGLEYPTNPATFDQNE--LITNRWRGKFLWQPSAIEDLKVLYSLSYNDEKGDS 269
              + + +  +  T     D ++  ++  + R      P  I        L  N+E    
Sbjct: 201 -WSQAFGRIDDTLTGKDDIDSSKGGMVRGQLRYAPTGSPWDITAAGQYDHLVSNEEIPVE 259

Query: 270 GRNYFTGDDPWAYKPIFQRYIETKSTTHSVKVDYELGEGQAFDLIVAYMDYNWGFESYEA 329
             +           P + R    K TT SV   YE   G    L  +Y D      S E 
Sbjct: 260 DPHKLVYSSALYGIPEYTR----KVTTGSVNASYEFDRGTLSSL-TSYQD-----RSLER 309

Query: 330 LATAQQYVDMKDKSYTVDGKYSFGLKDKDFNGFVGLAYFKRSQDFGSTGSSIYSGDDSTK 389
            A A +  + +  + + + +Y+FG KD   +G VG A+FK + DF    +  Y+    ++
Sbjct: 310 FAYAMEQPEFQT-TLSQEVRYAFGDKDGPLDGVVG-AFFKDT-DFTRKTAQYYTYQGPSE 366

Query: 390 SA------SVYGEVTYGLADSLWITVGGRVMREEQLRNFTMLYQGSQLLEKLDDANTVTL 443
           +A      +++GE+T  L   L +T G R   +    +FT   QG+     LD  N+   
Sbjct: 367 NAVASRSYALFGEMTQALTPVLDVTGGLRYSYDTSEIDFTR--QGASFYPALDFENSADF 424

Query: 444 P----KLVLQYALNDNTTLAASVRRGYNSGGGALSLVE-SEYYYYDEEFVNTYELSSRSA 498
                KL L + +N++  +   + RGY  GG   +++  ++   +D E    YEL     
Sbjct: 425 HNVSMKLALGWQINEDNRVYGLISRGYKPGGFNHAVMSAADRQAFDNETSTNYELGWHGT 484

Query: 499 FANGDVNLSANLFYNDFDGYQASNSARKIT------NIDKAVSYGVEAEFSAMLTENWQF 552
                + ++A+ +  + +  Q   +A  +T      N+  + SYG+E + +A   ++ Q 
Sbjct: 485 VVEDRLWVNASAYLIEAENKQIYVTADSMTGLQALRNLGDSRSYGLEVDVTARPLDSVQV 544

Query: 553 -ISGVGLLDSEIKQADPSYG-DIIGNQLNSAPHVTANAGLKYWL-----SDAFSFGFAGH 605
            + G       +   DP  G D  G  L  AP  T NA ++Y L         S   AG 
Sbjct: 545 TLGGTFGRSVFVSSTDPVTGEDYDGKTLPYAPDYTLNAAIEYTLPLSSFPGEISLRGAGR 604

Query: 606 YVGEYFADINNTESRVAGDYVVARVSLDYQTDSW-RVSGFVNNLFDEQAMTVNEPASRSY 664
           YV   + D +N  S     Y V  +S++  TD+  +V+ F +N+ D+   T +  A  + 
Sbjct: 605 YVSASYFDPSN--SLKQDGYPVLDLSVNLATDTGIKVAVFADNIADQGYRTYSYSAGAT- 661

Query: 665 PDGYAAIIDPRNIGVSAMYRF 685
              Y+     R +G+ A + F
Sbjct: 662 --TYSTAGQGRTVGMRASWAF 680