Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 720 a.a., TonB-dependent receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  129 bits (324), Expect = 5e-34
 Identities = 169/702 (24%), Positives = 281/702 (40%), Gaps = 105/702 (14%)

Query: 35  IERITVYGEKIERSLKDTTSSISVIDKETLDSGQYQSTSSALSEVPNVVVLSGSVPDIRG 94
           ++ +TV  EK+  + +DT  S++V+  E L+    + T   + +VPN+ +          
Sbjct: 73  LQPVTVTAEKMTSTDQDTPVSMTVVTGEDLERSAAKDTIDIVRQVPNMYMTK-------- 124

Query: 95  VSGNGSASGFNSFTG-----GARARVSTLVDGVAEPFVADLSGDTGLWDIQQIEVFRGPQ 149
            +G  ++  F S  G      A   V   VDGV    V     D  L DI ++EV RGPQ
Sbjct: 125 -AGQHASVAFLSMRGVTPFMEAEQPVGFFVDGVHYRNV-----DMELLDIDRVEVLRGPQ 178

Query: 150 STINGRNSIGGTVFIKTEDPTFDWQGAARVGYRDQDNFIDSAVMLSGPILDDELAFRVSG 209
           ST+ GRN+  G V I T DP    +G   VG  + +    S +   GP+  ++ ++R + 
Sbjct: 179 STLYGRNTEAGAVTIITRDPEPHQEGQVSVGIGNYNRKTISGIT-GGPLGSEDWSYRAAV 237

Query: 210 QNVTGETYNKGLEYPTNPATFDQNELITN-RWRGKFLWQPSAIEDLKVLYSLSYNDEKGD 268
           Q +  + Y     +   P   D  +  TN   R K  WQP    D+   Y          
Sbjct: 238 QFLDSDGY-----FTREPDGADDVDDATNVNARFKVRWQPQQAWDVIATYD--------- 283

Query: 269 SGRNYFTGDDPWAYKPIFQRYIETKSTTHSVKVDYELGEGQAFDLIVAYMDYNWGFESYE 328
            G  Y  G    A     +      S+ +    D ++  G    +             YE
Sbjct: 284 -GARYREGSTNIAPLSALREDSHKVSSNYIGSNDSDVHGGNVRAV-------------YE 329

Query: 329 ALATAQQYV-----DMKDKSYTVDGKYSFGLKDK---DFNGFV----------------- 363
           A A     +     + KD +Y VDG     ++ +   D++ F                  
Sbjct: 330 APAVTVTSISAYGYENKDTTYDVDGSALDLMRLRTGVDYSRFTQELRLSSPEGASGPRWV 389

Query: 364 -GLAYFKRSQ--DFGSTGSSIYSGDDS------TKSASVYGEVTYGLADSLWITVGGRV- 413
            G+ YF ++   D   T + +  G  S      T++ + +G+VT+ L DSL +  G R  
Sbjct: 390 GGVYYFDQTDHNDIDMTMTGMGMGVQSVRTTTDTRNMAAFGQVTWPLIDSLSLITGLRYD 449

Query: 414 -MREEQLRNFTMLYQGSQLLEKLDDANTVTLPKLVLQYALNDNTTLAASVRRGYNSGGGA 472
             R++     T    G       D      LPK+ L+Y         A+   GY +GG  
Sbjct: 450 HERKDVESQQTWAAMGRDTGVDQDMTFHAWLPKVGLEYKPFPTLLTYATYSGGYKAGGFN 509

Query: 473 LSLVESEYYYYDEEFVNTYELSSRSAFANGDVNLSANLFYNDFDGYQASN---SARKITN 529
            +L +     YD E+   YE+  +    +  ++   +LF+ D+   Q      S   I+N
Sbjct: 510 -NLADPGNEKYDAEYTRNYEIGVKHTALDNTLSTKLSLFWIDWTDQQVEELILSQSNISN 568

Query: 530 IDKAVSYGVEAEFSAMLTENWQFISGVGLLDSEIKQADPSYGDIIGNQLNSAPHVTANAG 589
             ++VS GVE E +   T+     +G G  D+   + + +  D  G +  +AP  T + G
Sbjct: 569 AGQSVSRGVELELAWKATKALLLKAGAGWNDAHFTKYEDNGTDFSGKRPPNAPAYTYSLG 628

Query: 590 LKYWLSDAFSFGFAGH--YVGEYFADINNTESRVAGDYVVARVSLDYQTDSWRVSGFVNN 647
             Y    +F  G   H  ++G      N+  ++    Y +  +   YQ +S+ V+ +V N
Sbjct: 629 ADY----SFENGLYAHADWLGTGEVYFNSANTQKERPYGLLNLKTGYQGESYEVALWVKN 684

Query: 648 LFDEQAMTVNEPASRSYPDG---YAAII-DPRNIGVSAMYRF 685
             D       + A+R++  G   Y  I  DPR  G++   R+
Sbjct: 685 ALDA------DYATRAFDLGGGTYGGIAGDPRTFGMTVTARW 720