Pairwise Alignments

Query, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 710 a.a., TonB-dependent receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (287), Expect = 9e-30
 Identities = 157/625 (25%), Positives = 254/625 (40%), Gaps = 58/625 (9%)

Query: 63  TLDSGQYQSTSSALSEVPNVVVLSGSVPDIRGVSGNGSA---SGFNSFTGGAR--ARVST 117
           T+ +G  Q T   L  + +VV L+     + G    GS     G  S   G      +S 
Sbjct: 83  TITAGDIQDTG--LENMEDVVRLTPGFNAMHGAQSWGSTFNVRGVGSLNPGGHEDGSISA 140

Query: 118 LVDGVAEPFVADLSGDTGLWDIQQIEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQGAA 177
            VDG+  P +  L  DT   DI Q+EV RGPQ T+ G+ S  G + I T  P+  ++G  
Sbjct: 141 YVDGIPVP-MGQL--DTYYLDIDQVEVLRGPQGTLYGKTSQAGAINITTVAPSDTFEGRL 197

Query: 178 RVGY-RDQDNFIDSAVMLSGPILDDELAFRVSGQNVTGETYNKGLEYPTNPATFDQNELI 236
            VG        ID  V  SGPIL D    R++G+ V       GL Y  +    D  ++ 
Sbjct: 198 GVGIGTGGTRGIDGVV--SGPILKD----RLNGRLVFDLKSEDGLMYAQDLGR-DLGDVD 250

Query: 237 TNRWRGKF--LWQPSAIEDLKVLYSLSYNDEKGDSGRNYFTGDDPWAYKPIFQRYIETKS 294
               RG F   W   A   L + Y +  N+++  + R      D   +  +F+ Y +   
Sbjct: 251 RAMVRGTFDATWNDRASTRLSLGYDVLDNNDQALAERK-----DYDKFMGVFEPYEDRTH 305

Query: 295 TTHSVKVDYELGEGQAFDLIVAYMDYNWGFESY-EALATAQQYVDMKDKSYTVDGKYSFG 353
            +  +   ++L +    +L+      +  + S   A+ T          S  V    +  
Sbjct: 306 ASLGMTNTFDLTDNVTLNLVTGAHLVDLEYASVPNAMITGINKDGETHFSQEVRLDGTAN 365

Query: 354 LKDKDFNGFVGLAYFKRSQDFGSTG--SSIYSGDDSTKSASVYGEVTYGLADSLWITVGG 411
             D    GF  L+ + R  D  +TG  S + SG+    S +++GE TY + D + +T G 
Sbjct: 366 RLDWTAGGF--LSQYHRDIDMKTTGLLSFVDSGEQEISSQAIFGEATYAVLDDVKVTTGL 423

Query: 412 RVMREEQLRNFTMLYQGSQLLEKLDDANTV--TLPKLVLQYALNDNTTLAASVRRGYNSG 469
           R+ R+ +  + T++         +D+         ++ L Y      T  AS+ RGY +G
Sbjct: 424 RLNRDNKSMDETVVNNTYGFTHTMDEDKAFYGWNGRVALAYTPTKTDTFFASISRGYKAG 483

Query: 470 G------GALSLVESEYYYYDEEFVNTYELSSRSAFANGDVNLSANLFYNDFDGYQA--- 520
           G       A+S ++     +D     +YE+  +  F +  +N+  + +Y    G Q    
Sbjct: 484 GFQTNHSTAMSGLQENTPSFDSTTSISYEVGYKGFFLDERLNIEGSAYYISTSGEQVLGY 543

Query: 521 -SNSARKITNIDKAVSYGVEAEFSAMLTENWQFISGVGLLDSEIKQ-ADPSYGDI--IGN 576
            + + + I +   A S G+E    A LTE       +    + I Q AD         G+
Sbjct: 544 DTTTYKGIYHNVDAESMGLELSSRARLTEELTLGGSLAYTHAYITQDADLGVSGFASAGS 603

Query: 577 QLNSAPHVTANAGLKY------WLSDAFSF---GFAGHYVGEYFADINNTESRVAGDYVV 627
           ++ + P V      +Y       L DA  F    F G   G +F DI  T       +  
Sbjct: 604 EIPNVPKVAYTVFAEYRDALPESLIDASWFVRVDFRGQ-TGRWF-DI--THDYRGDSFAT 659

Query: 628 ARVSLDYQTDSWRVSGFVNNLFDEQ 652
             + L   TD W V+G+V N+ DE+
Sbjct: 660 TDLRLGLDTDGWSVNGYVTNVTDEK 684