Pairwise Alignments

Query, 189 a.a., formate dehydrogenase, iron-sulfur subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 251 a.a., ferredoxin from Burkholderia phytofirmans PsJN

 Score =  107 bits (266), Expect = 2e-28
 Identities = 73/203 (35%), Positives = 92/203 (45%), Gaps = 39/203 (19%)

Query: 1   MATMKFLCDTKRCIECNGCVTACKNENDS-------------ALEWGIQRRRVVTINDGK 47
           M  M  + D   C+ C+ CVT+CK  N S             A   G    RV +   G 
Sbjct: 1   MTQMALVIDLNVCVGCHACVTSCKEWNTSGESGSLADLNPYDADPSGTFFNRVQSFEAGS 60

Query: 48  -PGEASISV--ACMHCSDAPCMAVCPANCFYKT-EDGIVLHDKDTCIGCGYCLYACPFGA 103
            P   +I    +C+HC D PC+ VCP    YK  EDG+VL D D CIGC YC +ACP+GA
Sbjct: 61  FPNAETIHFPKSCLHCEDPPCVPVCPTGASYKRKEDGLVLVDFDRCIGCKYCAWACPYGA 120

Query: 104 PQFPQKGAFGNRGKMDKCTFCAGG-PEETHSEAERQKYGSNRIAEGKLPMCAELCATKAL 162
            +  +     +R +M KCT C     +E  SE +RQ            P C   C T A 
Sbjct: 121 RELDE-----SRKEMTKCTLCVDRIHDENLSERDRQ------------PACVLACPTSAR 163

Query: 163 LAGD----AEVVSNIFRERVAYR 181
           L GD      VVS    ER  Y+
Sbjct: 164 LFGDIHDPESVVSKAIEERGGYQ 186