Pairwise Alignments

Query, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 357 a.a., formate dehydrogenase subunit gamma from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (616), Expect = 2e-68
 Identities = 121/339 (35%), Positives = 197/339 (58%), Gaps = 10/339 (2%)

Query: 2   LNKQLNKSLRSLFALMVLVMGLGLGSVMSASPVQASDQQSSQ--QQAKAQTSEADLWRAV 59
           + +QL+++ R +  L+  ++         A PV A +       Q+   Q + AD WR V
Sbjct: 3   MRQQLSRATRFVLPLLAALL------CWLAQPVMAEENAKPDVVQKEMTQLAGADFWRQV 56

Query: 60  KSGETGYTTAEGVEAGVLINVAGNQGKELRNQYITPIMALAVTGVFGVFLLFYLVNGPSK 119
           + GE GYTT++  E GVLI+  G     L+ ++++P  A+A+ G   + +L Y+  GP  
Sbjct: 57  RQGEAGYTTSQSPEHGVLISKPGETWFILKEKWMSPAGAVAIFGSIAMVVLAYIAVGPLM 116

Query: 120 LSHGFSGKMVVRWSKADLWIHWIMAISCLVLMFTGLTIMLGKHVVQELLGPDIWAPLIYG 179
           LS   +G+ + RWS++D  +HW MA + L L F+GL ++ GKH ++  +  ++W  +IY 
Sbjct: 117 LSKPRTGRKLNRWSRSDRALHWSMAFTFLTLAFSGLMLVYGKHFLKPYIPSELWGWIIYA 176

Query: 180 SKTVHDWAGPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFAN 239
           +K  H++ GP+F +  +  ++KW     F   D++WF+ +GG +  G +KG HP +GF+N
Sbjct: 177 AKQYHNYMGPLFFILLMFVLLKWWRKSIFNKVDVQWFMKLGGMV--GKYKGTHPSAGFSN 234

Query: 240 AGEKMWFWTLTLFGLFISVSGIMLVLPGLDLPREASMAALLIHSISAVILIAFTIVHIWM 299
           AGEK  +W L +FG F ++SG++L  P     R     + LIH +SA+ILI   I HI++
Sbjct: 235 AGEKAIYWLLIVFGTFAAISGLVLDFPIFGQTRRDMELSNLIHMLSALILICGFIFHIYI 294

Query: 300 ATVLSEGGMECMKSGYCDENWAIQHHNLWYDEIKANGSL 338
                EG +E M +G  DE WA +HH+LWY+E+K  G +
Sbjct: 295 GLFGMEGALEGMVTGKVDETWAKEHHDLWYEEVKRRGEI 333