Pairwise Alignments

Query, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 330 a.a., formate dehydrogenase, gamma subunit (RefSeq) from Shewanella loihica PV-4

 Score =  364 bits (934), Expect = e-105
 Identities = 176/337 (52%), Positives = 231/337 (68%), Gaps = 9/337 (2%)

Query: 6   LNKSLRSLFALMVLVMGLGLGSVMSASPVQASDQQSSQQQAKAQTSEADLWRAVKSGETG 65
           +NK  +    ++ LV+G    S +S +   A+D   +        +E  +W  +++G TG
Sbjct: 1   MNKWFKQFSVILALVIGTTF-SALSFAHGDATDHTHA-------ATEGQIWSEIQAGATG 52

Query: 66  YTTAEGVEAGVLINVAGNQGKELRNQYITPIMALAVTGVFGVFLLFYLVNGPSKLSHGFS 125
           YTT+ G      IN    +  ELR+ ++ P +  A+ G+  +F+LF  VNG SKL HGFS
Sbjct: 53  YTTSHGQFHNQPINSYDLRVLELRSDWLAPALMAALFGMIIIFVLFIKVNGISKLHHGFS 112

Query: 126 GKMVVRWSKADLWIHWIMAISCLVLMFTGLTIMLGKHVVQELLGPDIWAPLIYGSKTVHD 185
           GKMV RWSK D+ IHW+ AI CL+L+ TGLT++ G+   Q  LG   WA L+YG+K +HD
Sbjct: 113 GKMVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYLGEGFWAGLVYGAKQIHD 172

Query: 186 WAGPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMW 245
           +    F++ W +    W   Q  KMYD+KWFLVVGGYINFGPFKGKHPD+GFANAGEKMW
Sbjct: 173 YMAIPFMIGWALMTTLWAKNQLPKMYDVKWFLVVGGYINFGPFKGKHPDAGFANAGEKMW 232

Query: 246 FWTLTLFGLFISVSGIMLVLPGLDLP-REASMAALLIHSISAVILIAFTIVHIWMATVLS 304
           FW    FGL IS SG++L+ P L  P R  S+ AL++HS+SA+++ AF+IVHI+MATV+S
Sbjct: 233 FWAFAFFGLIISASGMLLLFPNLFEPSRTLSLIALVLHSVSAIVICAFSIVHIFMATVMS 292

Query: 305 EGGMECMKSGYCDENWAIQHHNLWYDEIKANGSLRYK 341
           EGGMECM SGYCDENWA QHHNLWYDEIKANG+L+YK
Sbjct: 293 EGGMECMVSGYCDENWATQHHNLWYDEIKANGTLKYK 329