Pairwise Alignments

Query, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 335 a.a., formate dehydrogenase, gamma subunit (RefSeq) from Shewanella loihica PV-4

 Score =  550 bits (1418), Expect = e-161
 Identities = 258/339 (76%), Positives = 299/339 (88%), Gaps = 7/339 (2%)

Query: 6   LNKSLRSLFALMVL--VMGLGLGSVMSASPVQASDQQSSQQQAKAQTSEADLWRAVKSGE 63
           L KSLRSLF +++L  V+ +GLG   SA  V   D+Q+SQQ A   TS+A+LWRAVKSG+
Sbjct: 2   LLKSLRSLFTVLLLPLVLAMGLGLTTSAYAV---DEQTSQQMAN--TSDAELWRAVKSGD 56

Query: 64  TGYTTAEGVEAGVLINVAGNQGKELRNQYITPIMALAVTGVFGVFLLFYLVNGPSKLSHG 123
            GYTTA+G E GV+INV+  +G  ++N Y+TP+MALAV GVFG FL+FYLVNGPSKLSHG
Sbjct: 57  KGYTTAKGAEGGVMINVSAIEGTNVKNDYLTPVMALAVCGVFGAFLIFYLVNGPSKLSHG 116

Query: 124 FSGKMVVRWSKADLWIHWIMAISCLVLMFTGLTIMLGKHVVQELLGPDIWAPLIYGSKTV 183
           FSGKMV+RWSKADLWIHW+MA+SCL L+FTGL IMLGKHV+Q  +G  IW  LIYGSKT+
Sbjct: 117 FSGKMVLRWSKADLWIHWVMALSCLALIFTGLNIMLGKHVLQPYVGTGIWGSLIYGSKTI 176

Query: 184 HDWAGPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEK 243
           HD+AGP+FIV+W +CVVKWMPLQTFK+YDLKWFLVVGGYINFGPFKGKHPDSGFANAGEK
Sbjct: 177 HDYAGPLFIVAWAICVVKWMPLQTFKLYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEK 236

Query: 244 MWFWTLTLFGLFISVSGIMLVLPGLDLPREASMAALLIHSISAVILIAFTIVHIWMATVL 303
           MWFWTLTLFGLFI+VSGIMLV+P L+LPREASMAALL+H +SA+I+IAFTIVHIWMATVL
Sbjct: 237 MWFWTLTLFGLFIAVSGIMLVMPALELPREASMAALLVHGLSAIIIIAFTIVHIWMATVL 296

Query: 304 SEGGMECMKSGYCDENWAIQHHNLWYDEIKANGSLRYKD 342
           SEGGMECMKSGYCDENWA+QHHNLWYDEIK NG+L Y+D
Sbjct: 297 SEGGMECMKSGYCDENWAVQHHNLWYDEIKDNGTLTYRD 335