Pairwise Alignments

Query, 301 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 365 a.a., LysR family transcriptional regulator from Cupriavidus basilensis FW507-4G11

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 4/199 (2%)

Query: 101 GSRLGLELLAKGYADVCTLHWGSME-DRNIRHPALLKGYNNHQQWIMVHGYSRQQGLIMR 159
           GS   +  LA+G  D+   H    E +R++   A    +   Q   ++    R QG+ +R
Sbjct: 155 GSLEAVAALAQGACDIAGFHVPIGEFERDML--ASFATWIRPQTHCLIQLAVRSQGIFVR 212

Query: 160 PDMHHGCQEEDKVLTLPWRWVSRQGGAGSQQHLEQWLLKHGARLDQLNVVLTA-YSEREL 218
           P           +     R+V+RQ G+G++  L+  L   G    ++       ++   +
Sbjct: 213 PGNPKQVTTLQDLCRADVRFVNRQTGSGTRLLLDLMLKARGIDSGRIEGYSNGEFTHAAV 272

Query: 219 AGYIARGDADIGFGCQSVALESGLSFVPLIKESFDFVMPQSIYFRRQLQQLFTMLSSGHT 278
           A YI  G AD GFG ++ A   GL FVP++KE + FV+ +       L      L S   
Sbjct: 273 AAYIGSGMADAGFGVETAARRFGLDFVPVLKERYFFVIERERLQSPALAGAVAALRSAGF 332

Query: 279 RQMAALLGGYDLTDCGQLL 297
           RQ+   L GYD +  G +L
Sbjct: 333 RQVVDALPGYDGSLTGTVL 351