Pairwise Alignments

Query, 301 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 366 a.a., substrate-binding domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 12/237 (5%)

Query: 67  RLLITGSDDPLLSMLVARLMAQVGSRELISYSATGSRLGLELLAKGYADVCTLHWGSMED 126
           R+  +GS DP + +L      Q     + +   +    GL  L +   +V   +    + 
Sbjct: 118 RIRFSGSHDPAVELLAETFARQSHGAHIDTVFCSAVE-GLICLQEKQCEVAGFYVAPQQG 176

Query: 127 R-NIRHPALLKGYNNHQQWIMVHGYSRQQGLIMRPDMHHGCQEEDKVLTLPWRWVSRQGG 185
             +I H  L K        ++     R+QGL+M  +     Q    +     R+++RQ  
Sbjct: 177 AGSIAHQTLRKWLRPTAVRLIALA-DREQGLMMSAEWAGRVQSLGDLARTQARFINRQRS 235

Query: 186 AGSQQHLEQWLLKHGARLDQLNVVLTAYSERE-----LAGYIARGDADIGFGCQSVALES 240
           +G++   +Q L+  G   DQ+N     Y E+E     +A  +  G AD+GFG +  A   
Sbjct: 236 SGTRLLFDQLLVAAGLYPDQIN----GYDEQEFSSDKIAVAVQEGRADVGFGLRPGAEAH 291

Query: 241 GLSFVPLIKESFDFVMPQSIYFRRQLQQLFTMLSSGHTRQMAALLGGYDLTDCGQLL 297
           GL FVPL +E++   + ++      +++L   +     R+    L GY  T+   LL
Sbjct: 292 GLHFVPLTRETYYLAVRRNDALSPWVRELIERIGQPAFREGLGHLAGYRPTEHVSLL 348