Pairwise Alignments

Query, 301 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 359 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 2/190 (1%)

Query: 109 LAKGYADVCTLHWGSMEDRNIRHPALLKGYNNHQQWIMVHGYSRQQGLIMRPDMHHGCQE 168
           LA+G  D+   H    E R++   A  + + + Q+ ++VH   R+QGL +      G   
Sbjct: 160 LARGECDLAGFHLPLGEFRSVCADAYRR-WLDPQRHVLVHLTRRKQGLFLGKGNPKGIAG 218

Query: 169 EDKVLTLPWRWVSRQGGAGSQQHLEQWLLKHGARLDQLNVVLTA-YSERELAGYIARGDA 227
              +     R+V+RQ G+G++  L+  L K G   D++N   +A  +   +A ++A G A
Sbjct: 219 LGDLARDDIRFVNRQPGSGTRMLLDLALRKVGVDPDRVNGYASAELTHSAIAAFVASGMA 278

Query: 228 DIGFGCQSVALESGLSFVPLIKESFDFVMPQSIYFRRQLQQLFTMLSSGHTRQMAALLGG 287
           D+GFG +  A   GL F+P++ E + F   ++   R  L  +  +L     R+    L G
Sbjct: 279 DVGFGVEPAAHHFGLDFIPIVDEDYYFACDRARLERMPLATVLGLLRGSAFRRSVDQLEG 338

Query: 288 YDLTDCGQLL 297
           YD  DCG+++
Sbjct: 339 YDPQDCGKVV 348