Pairwise Alignments

Query, 401 a.a., ISSod5, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 425 a.a., transposase from Burkholderia phytofirmans PsJN

 Score =  295 bits (754), Expect = 2e-84
 Identities = 147/373 (39%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 33  KQLTEAALAAELDGHLASTEG-------ANRKNGKTTKTVKSPLGNFELNTPRDRAGTFE 85
           K L E A+ AE+  HL    G        N +NG + KT+ +  G   ++ PRDR G+FE
Sbjct: 51  KALIERAMGAEMKMHLGYPAGQPKPDGQGNERNGASGKTLLTDYGPLRVDLPRDRDGSFE 110

Query: 86  PQLVKKHQTQLTDEMERKIIGLFSLGSSYQDIRAHIEDMYGMSVSNGTVNAITDKLLPEL 145
           P L+ +H+ + T   ER II +++ G S ++I+A + + YG  VS   ++++TD+++ E 
Sbjct: 111 PILIPRHERRFTGFDER-IIAMYARGMSVREIQAFLAETYGTEVSPDFISSVTDEVMAET 169

Query: 146 QAWRERELEPLYPVIWLDAIHYKIKENGRFISKAVYTILALNVEGKKELLGLYLSDNEGA 205
            AW+ R LEP+YPV++ DA+  KI++ G   +KAVY  L +  +G++++LGL++   EGA
Sbjct: 170 LAWQNRPLEPMYPVVFFDALRVKIRDEGVVSNKAVYLALGIQADGQRDVLGLWIEQTEGA 229

Query: 206 HHWLSVLTDLYNRGVKDILIACVDGLKGFPEAIETIYPQTEVQLCVIHQIRNSMKYVASK 265
             WL V  +L  RG +DILIA VDGLKG  EAI T YP+T VQ C++H +RNS++Y + K
Sbjct: 230 KFWLKVFNELKTRGCQDILIAVVDGLKGLAEAIGTAYPRTAVQTCIVHLMRNSLEYASYK 289

Query: 266 HQKAFMADLKCVYKAATLNAAEMALDEL-ETKWGDKYPVVIKSWRNKWALLSVYFKYPDY 324
            +KA  A L+ +Y A    AA  AL+   E +WG KYP +++SWR  W  ++ +F +P  
Sbjct: 290 DRKAVAAALRPIYTAVNELAARQALEAFAEGQWGTKYPTIVQSWRRAWENVTPFFVFPPE 349

Query: 325 VRTAIYTTNAVEAVHRQFRKLTKTKGGFANENSLLKLLYAGILKASERWTHPIQNWNLTL 384
           +R  IYTTNA+E+++ Q RK+ KT+G F N+ + +KLL+  +     +      +W   +
Sbjct: 350 IRRVIYTTNAIESLNMQLRKIIKTRGHFPNDEAAIKLLWLALRNVLAKSVRTTFDWKSAM 409

Query: 385 SQLSIHFEGRLEN 397
           +Q +I F  R  N
Sbjct: 410 NQFAILFGERFTN 422