Pairwise Alignments

Query, 228 a.a., transcriptional regulatory protein CpxR (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  246 bits (627), Expect = 3e-70
 Identities = 130/227 (57%), Positives = 169/227 (74%), Gaps = 6/227 (2%)

Query: 1   MSRILLIDDDLGLSELLGQLLELEGFKLTLAYDGKQGLELALATDYDLILLDVMLPKLNG 60
           M+ ILLIDDD  L+ LL ++L+ EGF+++ A DG+ GL  A++ + DLILLDVM+PKLNG
Sbjct: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLA-AVSDEIDLILLDVMMPKLNG 59

Query: 61  FEVLRALRQHKQTPVLMLTARGDEIDRVVGLEIGADDYLPKPFNDRELIARIRAIIRRSH 120
            E L+ LR+   TPVLMLTA+G+EIDRV+GLE+GADDYLPKPF+DREL+ARIRAI+RR+ 
Sbjct: 60  METLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119

Query: 121 --LTAQEIHATPAQEFGDLRLDPSRQEAYCNEQLIILTGTEFTLLHTLALHAGELMNKEE 178
             LT +       Q   D+++ P +QEAYC  QL+ LT TEF LL       G  + KE 
Sbjct: 120 NGLTPKNSDVIECQ---DIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEM 176

Query: 179 LNEIVLGKKLMPFDRSLDMHLSNLRKKLPERSDGRPRVKTIRGKGYI 225
           L+  VLGK L  FDR++DMH+SNLRKKLPER DG+ R+KT+RG+GY+
Sbjct: 177 LSIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223