Pairwise Alignments

Query, 296 a.a., cation efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  141 bits (356), Expect = 2e-38
 Identities = 85/272 (31%), Positives = 149/272 (54%), Gaps = 2/272 (0%)

Query: 19  VATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHG 78
           +  +L ++ +K+LAW  +GS ++L+   +S  + +A++I +  I YA  PAD DH +GH 
Sbjct: 17  IPLSLGVMGLKMLAWWVTGSVALLSDGLESSVNVVAAVIAYAMIGYAAKPADADHPFGHH 76

Query: 79  KAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQK 138
           KAE  +A+ +   I+ +A L+++     ++ P  +   TLG+ ++  A V+      +  
Sbjct: 77  KAEYFSAVIEGVLIVLAALLIIWEAIPEMMAPVLLNAPTLGLAINFAAGVVNAIWAYVLI 136

Query: 139 RALAATNSTVVEADSLHYKSDLFLNAAVLLALVLS-QYGWWWADGLFAVLIACYIGQQAF 197
           RA +   S  + AD  H  SD+  +A VL+ L+L+   G+   D L AV++A  I  Q +
Sbjct: 137 RAGSRHRSPALSADGQHILSDVVTSAGVLVGLLLAIATGYAILDPLLAVIVAGNILFQGW 196

Query: 198 DLGYRSIQALLDRELDEDTRQRIK-LIAKEDPRVLGLHDLRTRQAGKTVFIQFHLELDGN 256
            +  RS+  L+D+ +  D  + IK  IA      LG+HDL+TRQAG  +F+ FH+ +   
Sbjct: 197 KVISRSVDGLMDKAVPADEEEAIKAAIAANAGGSLGVHDLKTRQAGPAIFVDFHMVVPEA 256

Query: 257 LSLNEAHSITDTTGLRVKAAFEDAEVIIHQDP 288
           +++ +AH I D     ++     A + IH +P
Sbjct: 257 MAVGDAHDICDRIEDAIRVVHPGAGIAIHVEP 288