Pairwise Alignments

Query, 177 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., Penicillin-Binding Protein C-terminus Family. from Pseudomonas stutzeri RCH2

 Score = 73.6 bits (179), Expect = 2e-18
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 1   MRLLTLISLLLLSLLAQATVYKWVDKDGKVHYSDEPHPNA-EIVELK-EKTLNQITLPLV 58
           +R    I LL  +L A   +Y ++D +G   ++D P     E V+L    ++     P  
Sbjct: 4   VRQAAAILLLATALPALGGIYSYIDAEGNRVFTDRPTGQVVEEVQLNPSNSMAAQPTPAP 63

Query: 59  SADSNDSQVIEQIKYQVVITSPAEEETVRDNNGDFQVTATVTPEIKSQYLMALKLDGKTI 118
            A     Q    + YQ+ I SPA +ET+R+N G   VT    P +++ +   + LDG+  
Sbjct: 64  RAVQPPKQQAAAVHYQLQILSPAADETIRNNAGTVSVTVQAEPALQAGHAYQVLLDGQPF 123

Query: 119 GQPQIGGTFKLSNIDRGEHTIVVDAMTQNGKVFASSSPRKIFLHQAAM 166
           G P    +F+LSN+DRG H + V  + +  +V   +  +   L + ++
Sbjct: 124 GAPGEETSFELSNVDRGTHQLAVAVVDEAERVLQRTENQPFHLIRTSL 171