Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 501 a.a., GTP-binding protein TypA/BipA from Pseudomonas fluorescens FW300-N1B4

 Score =  644 bits (1661), Expect = 0.0
 Identities = 319/497 (64%), Positives = 397/497 (79%)

Query: 106 MPQTRFVTKKAFAQGLKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYA 165
           MPQTRFVTKKAF  GL+PIVVINK+DRPGARPDWV+DQ+FDLFDNLGAT+EQLDF +VYA
Sbjct: 1   MPQTRFVTKKAFEAGLRPIVVINKVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYA 60

Query: 166 SALNGFATLDPDVVSEDMTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGR 225
           SALNG A L+   ++EDMTPL+Q+IV+ V +P  D DGPFQMQIS LDYNS++GVIGVGR
Sbjct: 61  SALNGIAGLEHTDMAEDMTPLYQSIVDNVPAPKVDRDGPFQMQISALDYNSFLGVIGVGR 120

Query: 226 INRGSIKTNQQVSVIGADGKVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKIS 285
           I RG +K N  V  IGADGK RNG++ +++G+ GL R +V+ A AGDIV I+G+  L IS
Sbjct: 121 IARGRVKPNTPVVAIGADGKKRNGRILKLMGHHGLHRVDVEEAAAGDIVCISGMDSLFIS 180

Query: 286 DTVCAAGNVEAMPPLSVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVAL 345
           DT+C    VEAM PL+VDEPT++MTFQVN SPF GKEGK+VTSRNI ERL +EL++NVAL
Sbjct: 181 DTLCHPDTVEAMKPLTVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVAL 240

Query: 346 RVEETDSPDRFAVSGRGELHLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTV 405
           RVEE DS D+F VSGRGELHLS+LIE MRREG+E+AV RPEVI++ +DG   EPFE +T+
Sbjct: 241 RVEEGDSADKFKVSGRGELHLSVLIETMRREGFEMAVGRPEVIIRLVDGVKHEPFENVTI 300

Query: 406 DVEEEHQGTVIEKLGIRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLI 465
           D+ EE QG V+E++G+RK ++ +M  DGKGRVR+++ IP+RGLIGF+ +FLT T+G G++
Sbjct: 301 DLPEESQGKVMEEMGLRKGDLTNMVPDGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGIL 360

Query: 466 YHSFDHYGPHKGGDIGQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVG 525
              FD Y   K GD+  R NGVL+S  TGKALT++L  LQ RG+LF+ H  E+Y GQ+VG
Sbjct: 361 TSIFDRYDVMKSGDMSGRQNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIVG 420

Query: 526 IHARSNDLTVNCLKGKQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSI 585
           +++R NDL VN  KGK+L NMRASG DE   L  P+  TLEQALEFI DDEL EVTPKSI
Sbjct: 421 LNSRDNDLGVNPTKGKKLDNMRASGKDETIALVPPVRFTLEQALEFIQDDELCEVTPKSI 480

Query: 586 RVRKKHLTENDRKRASR 602
           R+RKK L E++R RA++
Sbjct: 481 RLRKKILDESERTRAAK 497