Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 607 a.a., translational GTPase TypA from Pseudomonas sp. BP01

 Score =  811 bits (2094), Expect = 0.0
 Identities = 407/602 (67%), Positives = 485/602 (80%)

Query: 1   MLENLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKN 60
           M+ENLRNIAIIAHVDHGKTTLVDKLL QSGTL       ERVMDSND EKERGITILAKN
Sbjct: 1   MIENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKN 60

Query: 61  TAIKWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQG 120
           TAI WN Y INIVDTPGHADFGGEVERV+SMVDSVLLLVDA DGPMPQTRFVTKKAF  G
Sbjct: 61  TAINWNGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAG 120

Query: 121 LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVS 180
           LKPIVVINK+DRPGARPDWV+DQ+FDLFDNLGATDEQLDF +VYASALNG A LD   + 
Sbjct: 121 LKPIVVINKVDRPGARPDWVLDQIFDLFDNLGATDEQLDFKVVYASALNGIAGLDHTEMG 180

Query: 181 EDMTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVI 240
           EDMT L+Q +++ V +P  D DGPFQMQIS LDYNS++GVIGVGRI RG IK N  V  I
Sbjct: 181 EDMTALYQAVIDHVPAPAVDRDGPFQMQISALDYNSFLGVIGVGRIARGRIKPNTPVVAI 240

Query: 241 GADGKVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPL 300
            ADGK RNG++ +++G+ GL R +V+ A AGDIV I+G  EL ISDT+C    VEAM PL
Sbjct: 241 DADGKKRNGRILKLMGHHGLHRVDVEEAQAGDIVCISGFDELFISDTLCDPTAVEAMKPL 300

Query: 301 SVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSG 360
           +VDEPT++MTFQVN SPF GKEGK+VTSRNI +RL +EL++NVALRVEETDSPD+F VSG
Sbjct: 301 TVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKDRLDKELLYNVALRVEETDSPDKFKVSG 360

Query: 361 RGELHLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLG 420
           RGELHLS+LIE MRREG+ELA+ RPEVI++ +DG   EPFE +T+D+ EE QG V+E++G
Sbjct: 361 RGELHLSVLIETMRREGFELALGRPEVIIREVDGVKQEPFENVTIDIPEESQGKVMEEMG 420

Query: 421 IRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDI 480
           +RK ++ +M  DGKGRVR+++ IP+RGLIGF+ +FLT T+G G++   FD Y   K G +
Sbjct: 421 LRKGDLTNMVPDGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGILTSIFDRYDAVKSGHM 480

Query: 481 GQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKG 540
             R NGVL+S  TGKALT++L  LQ RG+LF+ H  E+Y GQ++G ++R NDL VN  KG
Sbjct: 481 SGRQNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIIGQNSRDNDLGVNPTKG 540

Query: 541 KQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKRA 600
           K+L NMRASG DE   L  P+  TLEQALE+I +DEL EVTPKSIR+RKK L E++R RA
Sbjct: 541 KKLDNMRASGKDEVIALVPPVRFTLEQALEYIQEDELCEVTPKSIRLRKKILDESERTRA 600

Query: 601 SR 602
           ++
Sbjct: 601 AK 602