Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 605 a.a., translational GTPase TypA from Pseudomonas aeruginosa PA14

 Score =  840 bits (2171), Expect = 0.0
 Identities = 414/602 (68%), Positives = 498/602 (82%)

Query: 1   MLENLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKN 60
           M+ENLRNIAIIAHVDHGKTTLVDKLL  SGTL  +   +ERVMDSND EKERGITILAKN
Sbjct: 1   MIENLRNIAIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKN 60

Query: 61  TAIKWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQG 120
           TAIKWN Y INIVDTPGHADFGGEVERV+SMVDSVLL+VDA DGPMPQTRFVT+KAF  G
Sbjct: 61  TAIKWNGYNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAG 120

Query: 121 LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVS 180
           L+PIVV+NKIDRPGARPDWVIDQ+FDLFDNLGATDEQLDFPIVYASALNG A LD + + 
Sbjct: 121 LRPIVVVNKIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMD 180

Query: 181 EDMTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVI 240
           ++M  LFQ I++ V +P  D +GPFQMQISQLDYNS++GVIG+GRI RG +K+N  V  I
Sbjct: 181 DNMDALFQAIIDHVPAPVVDTEGPFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAI 240

Query: 241 GADGKVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPL 300
             DG  RNG++ +++G+ GL+R EV  A AGDIV ++G+ EL ISDT+C   NVEA+PPL
Sbjct: 241 SDDGSKRNGRILKIMGHHGLQRVEVAEAEAGDIVCVSGMEELFISDTLCDPQNVEALPPL 300

Query: 301 SVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSG 360
           +VD+PT++MTFQVN SPFAG+EGK+VTSRNI ERL++EL+HNVALRVE  DSP++F VSG
Sbjct: 301 TVDQPTVSMTFQVNDSPFAGREGKFVTSRNIKERLEKELLHNVALRVEPGDSPEKFKVSG 360

Query: 361 RGELHLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLG 420
           RGELHLS+LIE MRREG+ELAV RPEV++   DGE  EP+E +T+D+EE+HQG+V+E++G
Sbjct: 361 RGELHLSVLIETMRREGFELAVGRPEVVIIEKDGEKQEPYENVTIDIEEQHQGSVMEQMG 420

Query: 421 IRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDI 480
           +RK ++ +M  DGKGRVR+++ IP+RGLIGF+  FLT TSGTG++  +F HYGP K G++
Sbjct: 421 LRKGDLSNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPIKAGEV 480

Query: 481 GQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKG 540
             R NGVL+S ATG ALT++L  LQ RG+LF+G   E+YEGQ+ GI++R NDL +N  KG
Sbjct: 481 SNRQNGVLVSMATGTALTYSLETLQSRGKLFLGPGDEIYEGQLAGINSRDNDLVINPTKG 540

Query: 541 KQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKRA 600
           K+L NMRASG DE   L  PI  TLEQALEFI DDELVEVTPKSIR+RKK L ENDRKR 
Sbjct: 541 KKLDNMRASGKDEVIALVPPIRFTLEQALEFIADDELVEVTPKSIRLRKKMLNENDRKRY 600

Query: 601 SR 602
            R
Sbjct: 601 ER 602