Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 607 a.a., GTP-binding protein TypA (RefSeq) from Shewanella loihica PV-4

 Score = 1093 bits (2828), Expect = 0.0
 Identities = 551/602 (91%), Positives = 573/602 (95%)

Query: 1   MLENLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKN 60
           MLENLRNIAIIAHVDHGKTTLVDKLL+QSGTL TRGEA ERVMDSNDLEKERGITILAKN
Sbjct: 1   MLENLRNIAIIAHVDHGKTTLVDKLLAQSGTLETRGEAAERVMDSNDLEKERGITILAKN 60

Query: 61  TAIKWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQG 120
           TAIKWNDYRINIVDTPGHADFGGEVERVLSMVD VLLLVDAVDGPMPQTRFVTKKAFAQG
Sbjct: 61  TAIKWNDYRINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTKKAFAQG 120

Query: 121 LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVS 180
           LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDP+   
Sbjct: 121 LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPEETG 180

Query: 181 EDMTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVI 240
            DMTPLF+TIVEKVSSPDADA+G FQMQISQLDYNSYVGVIGVGRI RGS+K NQQV+V+
Sbjct: 181 ADMTPLFETIVEKVSSPDADAEGAFQMQISQLDYNSYVGVIGVGRIKRGSVKVNQQVTVV 240

Query: 241 GADGKVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPL 300
           GADG  RNGK+GQVLGYMGL+R EV  ANAGDIVAITGLGELKISDTVCA GN EA+PPL
Sbjct: 241 GADGTTRNGKIGQVLGYMGLDRHEVAEANAGDIVAITGLGELKISDTVCAVGNAEALPPL 300

Query: 301 SVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSG 360
           SVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRF VSG
Sbjct: 301 SVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFRVSG 360

Query: 361 RGELHLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLG 420
           RGELHLSILIENMRREGYELAVSRPEVI+K IDGE CEP+ETLTVDVEEEHQG VIEKLG
Sbjct: 361 RGELHLSILIENMRREGYELAVSRPEVIVKEIDGEKCEPYETLTVDVEEEHQGAVIEKLG 420

Query: 421 IRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDI 480
            RKA+M+DMQ DGKGRVR+DF+IPSRGLIGFQTEF+TATSGTGLIYHSFDHYGP KGGDI
Sbjct: 421 TRKADMRDMQPDGKGRVRIDFIIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPVKGGDI 480

Query: 481 GQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKG 540
           GQR NGVLISNATGKALTFALFGLQDRGRL IGHAAEVYEGQVVGIH+R+NDLTVNCLKG
Sbjct: 481 GQRQNGVLISNATGKALTFALFGLQDRGRLMIGHAAEVYEGQVVGIHSRANDLTVNCLKG 540

Query: 541 KQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKRA 600
           KQLTNMRASGTDEAQVLT  I +TLEQALEFIDDDELVEVTP+SIRVRK+HLTENDRKRA
Sbjct: 541 KQLTNMRASGTDEAQVLTPHIQMTLEQALEFIDDDELVEVTPQSIRVRKRHLTENDRKRA 600

Query: 601 SR 602
           SR
Sbjct: 601 SR 602