Pairwise Alignments

Query, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 604 a.a., GTP-binding protein TypA/BipA from Dechlorosoma suillum PS

 Score =  775 bits (2001), Expect = 0.0
 Identities = 384/602 (63%), Positives = 477/602 (79%), Gaps = 1/602 (0%)

Query: 1   MLENLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKN 60
           M   +RNIAIIAHVDHGKTTLVD+LL QSGT     +  ERVMDSNDLEKERGITILAKN
Sbjct: 1   MSRPIRNIAIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKN 60

Query: 61  TAIKWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQG 120
           TAI++    INIVDTPGHADFGGEVERVL MVD V+LLVDAV+GPMPQTRFVTKKA   G
Sbjct: 61  TAIEYEGTHINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALGLG 120

Query: 121 LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVS 180
           L+PIVVINK+DRPGARPDWV+DQ FDLFD LGATDEQLDFPI+YAS LNGFA L  +  S
Sbjct: 121 LRPIVVINKVDRPGARPDWVVDQTFDLFDKLGATDEQLDFPIIYASGLNGFAKLSLEEES 180

Query: 181 EDMTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVI 240
            DM PLF+T++  V +P  D + P Q+QI+ LDY++Y G +GVGR+  G IK  Q V+V+
Sbjct: 181 SDMRPLFETVLSHVPTPAGDPEAPLQLQIAALDYSTYTGRLGVGRVLNGRIKPGQAVAVM 240

Query: 241 GADGKVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPL 300
               +V +G++ QVLG+ GL+R  V++A AGDIV I+G+ E+ I  T+    N   +P L
Sbjct: 241 NHGDQVASGRINQVLGFQGLDRVPVELAEAGDIVIISGIEEIGIGLTIADKDNPVGLPML 300

Query: 301 SVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDRFAVSG 360
           +VDEPTLTM F VN+SP AG EGK+VTSR I +RL +EL+ NVALRVE+T   D F VSG
Sbjct: 301 TVDEPTLTMDFMVNSSPLAGTEGKFVTSRQIRDRLTKELLTNVALRVEDTADSDVFRVSG 360

Query: 361 RGELHLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLG 420
           RGELHL+IL+ENMRREG+E+AV++P V+ K IDGE CEP+E LT+D+E+ HQG V+E+LG
Sbjct: 361 RGELHLTILLENMRREGFEIAVAKPRVVFKDIDGEKCEPYENLTIDLEDSHQGAVMEELG 420

Query: 421 IRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGGDI 480
            R+ E+ +M+ DG+GR R+++ IP+RGLIGFQ++F+T T GTGL+ H FD Y P K  D+
Sbjct: 421 RRRGELTNMESDGQGRTRLEYHIPARGLIGFQSDFMTMTRGTGLMSHIFDDYKPVK-PDL 479

Query: 481 GQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKG 540
             R NGVLIS   G+A+ +AL+ L+DRGR+F+    ++YEG ++GIH+R NDL VN +KG
Sbjct: 480 PGRHNGVLISQENGEAVAYALWNLEDRGRMFVSPGDKLYEGMIIGIHSRENDLVVNPIKG 539

Query: 541 KQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKRA 600
           K+LTN+RASGTDEA  LTTPI LTLE A+EFIDDDELVE+TPKSIR+RK+HL+ENDRKRA
Sbjct: 540 KKLTNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPKSIRIRKRHLSENDRKRA 599

Query: 601 SR 602
           +R
Sbjct: 600 AR 601