Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 555 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score =  160 bits (405), Expect = 7e-44
 Identities = 89/218 (40%), Positives = 129/218 (59%), Gaps = 8/218 (3%)

Query: 121 IVHSGISIPYGIAKKGEIYPMTSLEERNRELESIIQARTYELAEANNRLEKLSNTDGLTN 180
           +V  G+ I  G+   G I+     E++  + ++        L + N  LE +++ D LT 
Sbjct: 313 LVLLGLVIGLGVRLIGHIHSRIRAEDQLLDSQAA-------LIQLNQHLELIASEDKLTG 365

Query: 181 IGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQ 240
           + NRR FDQ L+ E+ R +R  +PLSLI++D DHFK +NDHYGHLAGD+CL  LA  + Q
Sbjct: 366 LANRRRFDQFLEVEFKRARRERSPLSLILIDADHFKRYNDHYGHLAGDECLIALARVVEQ 425

Query: 241 SGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLIQSLAIPHIKTNLGIVTVSVG 300
             RR  ++ ARYGGEE  ++LP TD   A   A+ + + I+   I H  +  GIVT+S+G
Sbjct: 426 FIRRPSDVAARYGGEEIAVVLPGTDESNARQVAEKILRAIRDEQIEHPASPFGIVTISLG 485

Query: 301 VACLLPSDKH-NALELVHQADTALYLAKSAGRNCIRSA 337
           VA  + +D+  +   L+  AD ALY AKS GRN +  A
Sbjct: 486 VATFVGTDRQLDQRGLIELADRALYAAKSQGRNRVNVA 523