Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 330 a.a., diguanylate cyclase from Rhodopseudomonas palustris CGA009

 Score =  146 bits (369), Expect = 6e-40
 Identities = 83/182 (45%), Positives = 109/182 (59%), Gaps = 1/182 (0%)

Query: 161 ELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFND 220
           +LAE + +L + + TD LT I NRR FD +L   ++   R+  PLSLI+LDIDHFK FND
Sbjct: 149 QLAEMHRKLVQANLTDELTAIANRRRFDGVLSTSYATHMRSGAPLSLILLDIDHFKAFND 208

Query: 221 HYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLI 280
            YGHL GD CL+ +A  + +   RA +L AR+GGEEFV +LP+TD   AL  A  + + I
Sbjct: 209 RYGHLEGDRCLQRIAEVIDRRMFRAADLAARWGGEEFVCILPDTDEAGALAVATALREAI 268

Query: 281 QSLAIPHIKTNLG-IVTVSVGVACLLPSDKHNALELVHQADTALYLAKSAGRNCIRSAPP 339
             LAIPH  + +  +VT S+GV          A  L   AD  LY AK+ GRN I  +P 
Sbjct: 269 LDLAIPHEASPIARVVTASLGVVTATCVPDKTAHSLFETADALLYEAKNLGRNRIVRSPS 328

Query: 340 NG 341
            G
Sbjct: 329 RG 330