Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  156 bits (394), Expect = 8e-43
 Identities = 94/241 (39%), Positives = 133/241 (55%), Gaps = 7/241 (2%)

Query: 99  SILSQETARLMLVFQQE-SKDWKIVHSGISIPYGIAKKGEIYPMTSLEERNRELESIIQA 157
           +ILSQ   R     Q     D   +   I+I     + G I+ +  +++    +      
Sbjct: 80  AILSQTLNRRPFPLQDHLHNDAHPIEQAITIAPLARESGHIHCLIQIQDVTAAVR----- 134

Query: 158 RTYELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKL 217
           R  +L E   +L+ LSN DGLT + NRR FD   Q+E+ R QR+ + +S++MLDID+FK 
Sbjct: 135 REQQLREQAQQLQALSNIDGLTGVANRRSFDARFQEEFQRAQRHGSDISVLMLDIDYFKE 194

Query: 218 FNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVH 277
           +ND YGH AGD CL ++AN L +  +R G+ VARYGGEEF ++LP      A   A  + 
Sbjct: 195 YNDCYGHQAGDTCLTVVANTLRRCLQRGGDFVARYGGEEFAVVLPGASHGAACKLASSLQ 254

Query: 278 QLIQSLAIPHIKTNLGI-VTVSVGVACLLPSDKHNALELVHQADTALYLAKSAGRNCIRS 336
           Q I  L IPH  ++    +++SVGVA   P     A +L+  AD ALY AK  GRN + S
Sbjct: 255 QEISRLGIPHANSHAASHLSISVGVATHTPQRNDRAQDLLRGADIALYQAKRQGRNRVVS 314

Query: 337 A 337
           A
Sbjct: 315 A 315