Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 343 a.a., diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  421 bits (1081), Expect = e-122
 Identities = 207/337 (61%), Positives = 265/337 (78%)

Query: 1   MRQRRLQLMQSLFDEYIEMYAARDDKLTARFSDDFSGYAGSSDILVTSKDEWIKITRQDF 60
           M   R +L++SLFDEYIEMYA RDD+LT+RFS++FSGY G  D LV  K EW++ITRQDF
Sbjct: 5   MDPERQRLIRSLFDEYIEMYATRDDRLTSRFSENFSGYTGGGDFLVKDKAEWVRITRQDF 64

Query: 61  AQVPERIRIEVLDLSLQDLAEDIIVITAFFHIHLPVPDSILSQETARLMLVFQQESKDWK 120
           AQV E +RIE+LDLSLQD++ D++++TAFFHIHLP+PD ILS+ETARL+L+F+QE+  W 
Sbjct: 65  AQVAEPLRIEMLDLSLQDISADVVLVTAFFHIHLPLPDHILSRETARLVLLFKQENGAWM 124

Query: 121 IVHSGISIPYGIAKKGEIYPMTSLEERNRELESIIQARTYELAEANNRLEKLSNTDGLTN 180
           I HSGISIPY + + GE+YP+  L ERNRELE++++ RT  L EAN++LE LS TDGLT 
Sbjct: 125 IAHSGISIPYHLVRDGEVYPLQGLHERNRELEALVEERTRALEEANSKLEALSYTDGLTG 184

Query: 181 IGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQ 240
           I NRR FD+ L +EWSR QR+  PL+LIMLD+D FK FNDHYGHL GD CL+ LA  L++
Sbjct: 185 IANRRAFDRTLVQEWSRAQRSAAPLALIMLDVDLFKHFNDHYGHLEGDACLQALAGVLTR 244

Query: 241 SGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLIQSLAIPHIKTNLGIVTVSVG 300
           +GRRA +LVARYGGEEFV+LLPNT    A + A+++ Q I +LA+PH  T   IVTVS+G
Sbjct: 245 AGRRASDLVARYGGEEFVVLLPNTSAPEAQEIARNIQQAIWALALPHEATAPRIVTVSLG 304

Query: 301 VACLLPSDKHNALELVHQADTALYLAKSAGRNCIRSA 337
           +A ++PS + +A  LVHQAD ALY AK AGRN ++ A
Sbjct: 305 IASVVPSREAHAETLVHQADEALYGAKRAGRNRLQLA 341