Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 483 a.a., diguanylate cyclase from Burkholderia phytofirmans PsJN

 Score =  152 bits (385), Expect = 1e-41
 Identities = 81/176 (46%), Positives = 114/176 (64%), Gaps = 6/176 (3%)

Query: 165 ANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFNDHYGH 224
           A ++L+ L+ TD LT + NR  FD  LQKEW R  R+  PLSL+ +DID FK +ND+YGH
Sbjct: 311 AESKLQHLARTDALTGLSNRGTFDDTLQKEWQRANRSGRPLSLLFIDIDQFKAYNDYYGH 370

Query: 225 LAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLIQSLA 284
            AGD+ L+ +A  +     R+ + VARYGGEEFV+ LP+TD   A + A+ V + +  L 
Sbjct: 371 QAGDEVLRAVAQCVGLCVLRSADQVARYGGEEFVVTLPDTDATGATNVAETVRRAVFDLN 430

Query: 285 IPHIKTNLGIVTVSVGVACLLPSDKHNALE---LVHQADTALYLAKSAGRNCIRSA 337
           + H+++  G VTVS+G   L+ SD+  A +   LV+ AD+ALY AKS GRN +  A
Sbjct: 431 LEHVQSRYGRVTVSIG---LVTSDERVARDGATLVNMADSALYEAKSTGRNRVCEA 483