Pairwise Alignments

Query, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 362 a.a., diguanylate cyclase from Burkholderia phytofirmans PsJN

 Score =  147 bits (371), Expect = 4e-40
 Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 1/190 (0%)

Query: 143 SLEERNRELESIIQARTYELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNN 202
           +L +R+    ++ Q++   LA  N  L++L+++DGLT + NRR  DQ L  EW R  R  
Sbjct: 168 NLIQRDEAYRALRQSQQQLLA-TNLELQRLTHSDGLTGLSNRRYLDQYLAAEWRRSTREK 226

Query: 203 TPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLP 262
           T L  +M+D+D+FK +ND YGH+AGD+ LK +A+ +     R  +L AR+GGEEF +++P
Sbjct: 227 TGLGFLMIDVDNFKAYNDTYGHVAGDEVLKTVAHTVESCLGRPADLAARFGGEEFAVVVP 286

Query: 263 NTDLQTALDTAKHVHQLIQSLAIPHIKTNLGIVTVSVGVACLLPSDKHNALELVHQADTA 322
            T        A+ +   I+ LAIPH  +  GIVT+S+G A L+P+      +L+  AD  
Sbjct: 287 GTSSGGLRLLAEKIRIAIEGLAIPHSGSATGIVTISIGAATLVPTVAEPVTKLIEAADVG 346

Query: 323 LYLAKSAGRN 332
           LY AK  G+N
Sbjct: 347 LYRAKRDGKN 356