Pairwise Alignments

Query, 500 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 919 a.a., histidine kinase from Azospirillum brasilense Sp245

 Score =  106 bits (265), Expect = 3e-27
 Identities = 77/241 (31%), Positives = 125/241 (51%), Gaps = 14/241 (5%)

Query: 269 LYREFNRATRLASQ----QVSFVGQVSHELKTPLTNITLYAEMLNEMEAEEND-QRAHYL 323
           L  + +RA RLA++    + + +  +SH+L+TPL +I   A  L    A  ++  R    
Sbjct: 658 LAEDVDRA-RLAAETERLRSALLTSISHDLRTPLASILGSATSLTAYGAGMDEASRRDLA 716

Query: 324 GVIISESQRLSRLIQNVLTFTKLPQICIRQ----VDINQLMNQIYTAFKPVFEAKEIHLN 379
             I  E++RL+R I N+L  T+L    IR     VD+ + +         +     + ++
Sbjct: 717 ATIQEEAERLNRFIANLLDMTRLESGAIRPRTGPVDLAETVGSALGRAGRILAGHRVDVD 776

Query: 380 LNINGQLSTKTDVDLVTQIISNLLSNAEKYAATGKQVDLNVEQDNDNIFIHIRDYGNGIT 439
           L  +  +    DV L  Q++ NLL NA KYA TG  + +   ++ D + I +RD G+GI 
Sbjct: 777 LAADLPMLEADDV-LFEQVLFNLLDNAAKYAPTGSLIQVGASREGDRVRIEVRDEGDGIP 835

Query: 440 AKELKQIFQPFYRVRSSITEGVSGTGIGLTIARQLAETLSGEINAIN--NEPGMTFTLRL 497
           A ++++IF  FYRV++   +  +GTG+GL I R   E + G I A N  +  G  FTL +
Sbjct: 836 AADVERIFDKFYRVQAQDRQR-AGTGLGLAICRGFVEAMGGTIAAGNRKDRSGAVFTLTM 894

Query: 498 P 498
           P
Sbjct: 895 P 895