Pairwise Alignments

Query, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 425 a.a., transposase from Burkholderia phytofirmans PsJN

 Score =  315 bits (808), Expect = 1e-90
 Identities = 154/370 (41%), Positives = 236/370 (63%), Gaps = 9/370 (2%)

Query: 32  KQLTEAALQAELEQHLAH-------DPQPNRKNGKTPKTIKHPSGNFELDAPRDRNGTFE 84
           K L E A+ AE++ HL +       D Q N +NG + KT+    G   +D PRDR+G+FE
Sbjct: 51  KALIERAMGAEMKMHLGYPAGQPKPDGQGNERNGASGKTLLTDYGPLRVDLPRDRDGSFE 110

Query: 85  PQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYGLNVSNATVSAITDKLIPEL 144
           P LI +++   T   ER +++M++ GMS R+I   + + YG  VS   +S++TD+++ E 
Sbjct: 111 PILIPRHERRFTGFDER-IIAMYARGMSVREIQAFLAETYGTGVSPDFISSVTDEVMAET 169

Query: 145 KAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVYTLLALNMKGKKEILGLHLSENEGA 204
            AWQ RPL+  YP+V+ DA+  K+++DG   +KAVY  L +   G++++LGL + + EGA
Sbjct: 170 LAWQNRPLEPMYPVVFFDALRVKIRDDGVVSNKAVYLALGIQADGQRDVLGLWIEQTEGA 229

Query: 205 NYWLSVLADLNNRGVKDILIACVDGLTGFPEAIASIFPHTETQLCVIHQIRNSMKYVASK 264
            +WL V  +L  RG +DILIA VDGL G  EAI + +P T  Q C++H +RNS++Y + K
Sbjct: 230 KFWLKVFNELKTRGCQDILIAVVDGLKGLAEAIGTAYPRTAVQTCIVHLMRNSLEYASYK 289

Query: 265 NQKAFMADLKPVYRAVSKEAAEMALDEL-EAKWGDAYPLVINSWRRKWHNLSHYFKYPEH 323
           ++KA  A L+P+Y AV++ AA  AL+   E +WG  YP ++ SWRR W N++ +F +P  
Sbjct: 290 DRKAVAAALRPIYTAVNELAARQALEAFAEGQWGTKYPTIVQSWRRAWENVTPFFVFPPE 349

Query: 324 IRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGILNASDKWTMPIHNWSLCL 383
           IR+VIYTTNA+E+++ Q RK+ KT+G FPN+ + +KLL+  + N   K      +W   +
Sbjct: 350 IRRVIYTTNAIESLNMQLRKIIKTRGHFPNDEAAIKLLWLALRNVLAKSVRTTFDWKSAM 409

Query: 384 SQLAIYFEGR 393
           +Q AI F  R
Sbjct: 410 NQFAILFGER 419