Pairwise Alignments

Query, 405 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase II, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 398 a.a., 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like from Pseudomonas fluorescens FW300-N1B4

 Score =  392 bits (1007), Expect = e-113
 Identities = 211/393 (53%), Positives = 261/393 (66%), Gaps = 4/393 (1%)

Query: 7   ITQIGLCTPLGQTPEQVLARLIAGDTSAMQTSDSLLFGQSTLVAPVTESLPTIPAALTQF 66
           +  +G+   LG+  ++V   L AGD S M++    +  +S  VA V   L  IP  L   
Sbjct: 5   LNALGVICALGRDKQEVARNLFAGDCSGMRSEAGWVVERSLPVAAVRGELAPIPPELAHQ 64

Query: 67  DCRNNQLLLAAALQITDTVELAKQTYGADRIGVVLGTSTSGIAKGELALAYRNQHGHFPA 126
             RNNQLLL AALQI + +E A QTYG DRIGV+LGTSTSGI +    LA+  +   FPA
Sbjct: 65  SSRNNQLLLEAALQIREDIEQAIQTYGRDRIGVILGTSTSGIHEASSGLAHYIREHQFPA 124

Query: 127 DYHYFQQELGSTSDFLRQLFELQGPSYTISTACSSSAKVFASAKRLLEAKLCDMVIVGGI 186
           DY Y QQELG+ + FL    +L GP+Y ISTAC+SSA+   SA+RLL+  +CD V+ GG+
Sbjct: 125 DYDYQQQELGAPATFLADWLQLSGPAYVISTACTSSARALMSAQRLLDLGMCDAVLCGGV 184

Query: 187 DSLCQLTVNGFHALESVSKGHCNPFSANRDGINIGEGAALFTLTLATDNTANEACVLLAG 246
           DSLC+LT+NGF ALE+VS+  CNPFSANR+GINIGE A LF   L + N  N   + L G
Sbjct: 185 DSLCKLTLNGFSALEAVSEQRCNPFSANRNGINIGEAAVLF---LMSKNAGNRQPIALLG 241

Query: 247 IGESSDAHHMSAPHPEGAGAIAAMKAALRDAQISAQDIDYINLHGTATPKNDAMESRAVL 306
            G SSDAHH+SAP P G GA+ AM+ AL  A +  Q I Y+NLHGTAT  NDAMES AV 
Sbjct: 242 SGASSDAHHISAPEPTGRGALQAMRKALSRASLQPQQIGYLNLHGTATQHNDAMESLAVT 301

Query: 307 SVFGDTPPPASSTKPLVGHTLGAAGAIEAAFCYLLLSQHNHSFALPPHRFDGQQDPQDPS 366
           ++F     P SSTKP+ GHTLGAAGA+EAAFC+L LS  N   ALPPH +DGQ DP+ P+
Sbjct: 302 TLF-PQGVPCSSTKPMTGHTLGAAGALEAAFCWLSLSVDNREHALPPHVWDGQPDPELPA 360

Query: 367 IALVAPMQCAEHGKLNYVMSNSFAFGGSNASLI 399
           +  V P          Y+MSNSFAFGG+N SLI
Sbjct: 361 LHWVTPTDHLTSIAPRYLMSNSFAFGGNNVSLI 393