Pairwise Alignments

Query, 182 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 188 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  121 bits (303), Expect = 8e-33
 Identities = 68/167 (40%), Positives = 99/167 (59%), Gaps = 1/167 (0%)

Query: 11  LALIAYPVAVYLGLNYLPAGTIALVLCLLLIVRLMLQKQRVKTLALPLLVGIALTAGSFV 70
           L ++ YP+ ++     L   T+AL L L+ +VRL   +     L    +  +AL A +  
Sbjct: 16  LLILLYPLLIWYAHGKLEPRTLALSLVLIAVVRLFATRTG-GPLRWMGVAALALAAPAVY 74

Query: 71  AKRSDWLLYYPVVINLTMLALFSYSLYQGPSMIERLARLKEPDLPDEAIGYLKKVTLLWC 130
                 L  YPV I+  MLALF YSLY+ P++IER+ARL  PDLP   I Y ++VT +WC
Sbjct: 75  WNALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARLGSPDLPLFVIAYTRRVTQVWC 134

Query: 131 GLFILNGTMAAYTASFTSLATWTLYNGLIAYVLMGLLLGGEWLYRSF 177
             F +NG++A  TA + S A W++Y G+I+Y+ MGLL  GE+L R +
Sbjct: 135 LFFAINGSIALGTALWCSPAVWSMYTGVISYIAMGLLFAGEYLVRLY 181