Pairwise Alignments

Query, 182 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 220 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  109 bits (272), Expect = 4e-29
 Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 16/181 (8%)

Query: 7   VLTALALIAYPVAVYLGLNYLPAGTIALVLCLLLIVRLMLQK-----------QRVKTLA 55
           V+  L  +AYP  +     +    T   V C+L  + L LQ+           +R+ ++ 
Sbjct: 30  VVQVLLKLAYPALILCAWKW---DTPRYVGCMLFAI-LWLQRWAGSGPVATSLRRLSSID 85

Query: 56  LPLLVGIALTAGSFVAKRSDWLL-YYPVVINLTMLALFSYSLYQGPSMIERLARLKEPDL 114
             ++  ++  + + V   S+ LL  YP ++NL +L  F  +L +GPSMIE+ ARL  P+L
Sbjct: 86  WTVVGLLSCASAAIVLTNSELLLRLYPSLVNLGLLIAFGATLVRGPSMIEKFARLGNPNL 145

Query: 115 PDEAIGYLKKVTLLWCGLFILNGTMAAYTASFTSLATWTLYNGLIAYVLMGLLLGGEWLY 174
           P  A+ +  +VT +WC  F LNG  +AYTA + S A+W+LYNG IAYVL+G+LL  E ++
Sbjct: 146 PPGAVRHTLRVTQVWCAFFALNGVFSAYTAVYWSRASWSLYNGAIAYVLIGVLLVAEVIW 205

Query: 175 R 175
           R
Sbjct: 206 R 206